Trachemys scripta elegans (red-eared slider): 117886578
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Entry
117886578 CDS
T07347
Symbol
MMP2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117886578 (MMP2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117886578 (MMP2)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
117886578 (MMP2)
Peptidases and inhibitors [BR:
tst01002
]
Metallo peptidases
Family M10
117886578 (MMP2)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
117886578
NCBI-ProteinID:
XP_034644421
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All DBs
Position
13:32885332..32930610
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AA seq
658 aa
AA seq
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MKTHIVFSLFAFIFKVLLLQLYFFHQTLAAPSPIIKFPGDNSPKTDKELAVQYLNTYYGC
PKDNCNLFVLKDTLKKMQKFFGLPETGDLDQNTIETMKKPRCGNPDVANYNFFPRKPKWE
KNQITYRILGYTPDLDSETVDDAFARAFKVWSDVTPLTFSRINDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPGPGVGGDSHFDDDEQWTLGEGQVVKVKYGNADGEYCKFPFLFN
DKEYNSCTDAGRNDGFLWCSTTYNFDSDGKYGFCPHESLFTMGGNSEGQPCKFPFKFQGT
SYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKY
DSCTSAGRSDGKMWCASTSNYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGAL
MAPIYTFTKNFRLSQDDIKGIQELYGGSTDFGPDPAPTLGPVTPMLCKQDIIFDGISQIR
GETFFFKDRFMWRTVNPRNKPTGPLLVATFWPEVPEKIDAVYEAPQEEKTVFFSGNEYWV
YSASTLERGYPKKLTSLGLPPEVQHVNAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGF
PKLIADAWNGVPDNLDAVLDLSGSGYSYFFKDWYYLKLEATSLKIVKVGNVKSDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcacattgtttttagcctttttgccttcatttttaaagtactcttgctccag
ctatatttttttcaccaaactttagctgcaccgtcaccaatcattaagtttcctggagac
aactctcccaaaacagacaaagaactagcagtgcaatacctgaatacatactatgggtgc
ccaaaagacaactgcaatttattcgtgctgaaagatactttgaagaaaatgcagaaattc
tttgggctgcctgaaacaggagatctggatcaaaacactattgagacgatgaagaagccc
cgctgtggtaatccagatgtggccaattataacttctttccaagaaagccaaaatgggaa
aaaaatcagataacgtacaggattttagggtatacaccggatttggactccgaaacagta
gacgatgcctttgcccgagcctttaaagtctggagtgatgtcacacccctgacattttca
cgaattaatgatggagaagcggacattatgattaattttggacgatgggagcatggtgat
ggatatccatttgatggcaaggatggcctcctggctcatgcttttgcacctgggccaggt
gttggaggtgactcccattttgatgatgatgaacagtggactctgggagagggacaagtt
gttaaggtgaagtatgggaatgcagatggcgaatactgcaaatttcccttcctattcaac
gataaggaatataacagctgtactgatgcagggcgcaatgatggattcctttggtgctca
accacatacaactttgattccgatggcaaatacggattctgtccccatgaatctcttttc
acgatgggtggaaatagtgaagggcagccatgcaagttccccttcaaatttcaaggcaca
tcctacgacagctgtacaacagagggaaggacagatgggtaccggtggtgtggaactaca
gaagactacgacagagataagaaatacggcttctgcccagagactgcaatgtcaacggtt
ggtggaaattcagaaggagctccttgcgtatttcctttcactttccttggcaataagtat
gactcctgcacaagtgctggacgtagtgatggcaagatgtggtgtgcttccactagtaac
tatgatgatgaccgcaaatggggcttttgtccagatcaaggttacagtcttttcttggtt
gctgctcatgaatttggccatgccatgggactagagcactctgaggacccaggagctctt
atggctccaatctacacctttaccaagaacttcagactgtctcaggatgatattaaagga
atccaggaactttatggaggatccactgattttgggccagatccagctccaacgcttgga
ccagtcaccccaatgttatgcaaacaagacatcatatttgatggtatatcccaaattaga
ggagaaacctttttcttcaaagacagattcatgtggaggactgtaaacccccgaaataaa
cccacaggtcccttgcttgtggctacattctggccggaggtgccagaaaaaatcgatgct
gtctatgaggcccctcaggaagagaagaccgtgtttttttcaggaaatgagtactgggtt
tattcagccagtactttggagagagggtatccaaagaaactcaccagtctggggttacct
cccgaggtacaacacgtcaatgcagcttttaactggagcaaaaacaagaagacatacatt
tttgcaggagacaagttttggaggtacaatgaagtaaagaagaaaatggaccctgggttc
cctaaattaattgctgatgcttggaatggagttccagataacctagatgctgtgttggat
ctcagcggaagtgggtacagctactttttcaaggactggtattatctaaaactggaagcc
actagcttgaagatcgttaaagttggcaatgtaaaatccgattggctgggttgctga
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