Trachemys scripta elegans (red-eared slider): 117887723
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Entry
117887723 CDS
T07347
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04020
Calcium signaling pathway
tst04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117887723 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117887723 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117887723 (GRIN2C)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Glutamate (ionotropic)
117887723 (GRIN2C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
117887723
NCBI-ProteinID:
XP_034646323
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All DBs
Position
14:21315361..21348742
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AA seq
1386 aa
AA seq
DB search
MGRALTHTLVLSMVLGCSAVIMDLLLPSPGEPVVNVAVVFGGSSYPLHIRSRLTHQSFLD
LPLEIHPVTVIVNDTNPSTLLTQICNILASTKIHGIVFEDNIGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGHNI
FVDVIRSFTDASYFGWELQDVLTFEMTQDGSNSKTQRLLRQVDAQVMIVYCSREEAVYLF
QVAEQAGLVGPGYIWIVPSLTVGNMEIPPVSFPVGLISVVTESWKMSLRQKVRDGVAIIA
TGAESYFRTHGYLPDVGKDCKTPPTTTANSTFYRHLLNVTWEHRDFSFNEGGYLVRPTMV
VISLNRHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPVSDNRHLTVATLEERPFVIVENT
DPASGVCVRNTVPCRKQTNYTDSGDGPVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYLV
TNGKHGKIVRGIWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARS
NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVGYNQNLTSGKKSGGPSFT
IGKSIWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYID
TVSGLSDKKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSL
KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSKWKRPIDLALL
QFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHL
VYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQNLESPVRVRTPDVTANSAQVNVLKMLQ
AAKDMVSTATVGSSLENATRTIENWTNRSENLQTTFSLRTPQLVVQNTSVSNRPPYSSNM
ATTEKLGRDCAQRAVPPPISAPQQPFVDSRLPANENWRAVNEQPPILHPLKFRGSYSGDK
VLPGSTMGGFPHLLVRTMPPSHFGSHVPLGNHLSTPLSPLKTQRELPLPDIYKEHKRPVS
RGEEKEKLPPNVHLVYGEGGHGGPAQLAKLFSTSEKSPFLPPDCMHSSFSKADRPCRPLV
TVFKEPEPVELPLLGKEKPNRRASLLRSAWEQNEKHHSLGIRRYDGKSSARGDVPDLFPK
AGVALRQTPMYYPTEALRPSAMCNRKRVEANSRLPWKGQRLLHSQAARLPSYGEACLQNA
TGVHRASSTVVHKQYAYMNSYTNLPMYLGRLYQGPPPLCEHSRTSQRCVSRAPWAPRSRD
YLVQEDSRRTMYFDSMYRDYTERSRAEPSFLQMVNTERRDLLAAQRMNSPYAARSWRRIS
SLESEV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagctctgacacacactctggtactgtccatggtgctgggctgttcagctgtc
ataatggatctcctgctgccaagccctggggagccagtggtaaacgtggccgtggtattc
ggaggctcctcataccctctccacatccgcagccgtctgactcaccagagcttcctggac
ttgcctctggagatccacccggtcacggtgattgtgaacgacaccaaccccagcaccctc
ctgacccagatctgcaacatcctcgccagcaccaagatccacggcatcgtctttgaggac
aacatcggcacagaggctgtggcacagatcctggacttcatatcctcccagacccaagtc
cccatcatcagcatcagcgggggctctgccgtggtcctgacccccaaggagcccggctct
gccttcctgcagctgggagtctccattgagcagcagatccaggtgatcttcaaagtcctg
gaggaatatgactggggctcctttgcggtcatcaccagcctgtatccagggcacaacatc
tttgtggacgttatccgttccttcacagatgccagctactttggttgggaactccaggac
gtcctgacctttgagatgacccaggatgggagcaactccaaaacccagcggctgctacgg
caggtcgatgcccaggtgatgattgtgtactgctcgcgggaggaggctgtgtacctcttc
caggtggcggagcaggcgggcttggtcgggcccggctacatctggattgtgcccagcctg
acggtggggaacatggagatcccgcctgtctctttccccgtcggcctcatcagtgtggtg
accgagagctggaagatgagcctgaggcagaaggttcgggacggcgtggccatcatagcc
acgggggctgagagctacttcaggacccacgggtacctcccagatgtgggcaaggactgt
aagacgccacctaccaccaccgctaacagcactttctacaggcacctgctgaacgtgacg
tgggagcacagggacttctccttcaatgaaggtggctacttggtgaggcccaccatggtg
gtgatctcactgaaccggcatcggctctgggagatggtggggaaatgggagaaggggatc
atccacatgaagtacccagtgtggccccgctatggctccttcctgcagcccgtgtcggac
aatcgccacctcaccgtggccaccctcgaagagaggccctttgtgatcgtggagaacacg
gacccggcctctggcgtctgtgtgcgcaacaccgtcccctgccggaagcaaaccaactac
accgacagtggggatggacctgtggacccctacaccaaactctgctgcaagggcttctgc
attgatatcctgaagaagctggccaaggccgtgaagttctcctacgacctctacctggta
accaatggaaaacatgggaagatagtgcgtggcatctggaatggcatgattggcgaggtg
tactaccagcgagcggacatggccatagggtccctcaccatcaacgaggagcggtctgag
attgtggacttctctgtgccctttgtggagacaggcattagtgtcatggtggctagaagc
aatgggacagtctcgccttctgccttcctagagccctacagcccggcggtgtgggtgatg
atgttcgtgatgtgtctcactgtggtcgccatcaccgtcttcatgttcgaatatttcagc
cccgtcggctacaaccagaatctaaccagtggcaaaaagtccggcgggccctccttcacc
attggcaaatctatctggctgctgtgggccctggtctttaataactcggtgcccattgag
aatccaaaaggcaccacaagtaagatcatggtgctgatctgggccttcttcgcagtgatc
ttcctggccagttacacagctaacctggcagcctttatgatccaggagcaatatattgac
accgtctctgggctgagtgacaagaagttccaacggccccaggagcagtatcccccattc
cgcttcggcaccgttcccaacggcagcacggagaggaacattcggagcaactatccagat
atgcacacgcacatggtgaaatacaaccagcgctcggtggaagatgccctgaccagcctc
aaaatggggaagctggacgcctttatctacgatgctgctgtgctgaattacatggccggc
aaggacgagggctgcaagctggtgaccattggcagcggaaaggtctttgctaccaccggc
tatggcattgctctgcagaaggattccaagtggaagaggccaattgacttggcccttctg
cagttcctgggagatggggaaacccagaaactggagaccgtctggctgtcggggatctgc
cagaatgagaagaatgaggtgatgagcagcaagctagacattgacaacatggccggggtc
ttctacatgctgttggtggccatggggttgagcctgctggtctttgcctgggagcacctg
gtgtactggaaactgcgccactctgtccccaagtcgcacaaacttgacttccttctggcc
ataagcaggggcatttatagctgtttcaatggagtccagaatctggagagccctgttcgt
gttcgcactcccgatgtcaccgctaactctgcccaagtcaacgtgctgaagatgctgcag
gctgccaaggacatggtgtcaacagccactgttgggagctcccttgagaatgccacgcgc
accatcgagaactggacgaaccggagcgaaaacctccagaccacgttctcccttagaact
cctcagcttgttgtccagaacaccagtgtgtccaacaggccaccctactcctccaatatg
gccacaacagagaagcttgggcgggactgtgcccagagggctgttccaccacccatctct
gctccccaacagccctttgtggactctaggctgccagctaatgaaaactggagggcggta
aatgagcaacctccaatacttcaccccttaaagtttagaggaagctattctggggataaa
gttcttccaggttccaccatgggtggctttccgcacctcctggtgagaaccatgcctcca
tcccatttcgggagccacgtgcccctgggaaaccatcttagcactcccctctcaccactg
aaaactcaaagggagcttcccctcccagacatctacaaagagcacaagcgccctgtttcc
aggggagaggaaaaggagaagctcccaccaaatgttcacctggtatatggggaaggagga
cacgggggcccagcccagctggcaaagctgttctccacttctgagaagagccctttcttg
cctcccgactgcatgcacagctccttctcaaaagccgacaggccttgcagacctttagtt
actgtgttcaaggaaccggaaccagtggagctacctcttctgggcaaggagaagccgaac
aggagagccagcctgctgaggtctgcctgggagcagaatgagaaacaccattccctaggc
atccggagatacgacggcaagtcttccgcccgaggagatgtgccagatctcttccccaaa
gccggtgtggcgctgaggcagacaccaatgtactatcccactgaagccctcaggcccagt
gctatgtgcaacagaaaacgcgtggaggcaaactccaggctcccttggaaaggacagcgg
ctcctgcactctcaggcggcgaggctgccctcttacggggaggcatgcctgcagaatgcc
accggcgtgcaccgggcctcctccactgtggtgcacaaacagtacgcctacatgaactcc
tatacgaacctgcccatgtacttggggcggctttaccaggggcctcccccgctctgcgaa
cactccaggaccagccagcgctgtgtcagtcgggctccctgggcacccaggagcagggac
tacttggtccaagaggacagccggaggaccatgtactttgacagcatgtacagagactat
acagagcgaagcagagcagagccgtccttcctccagatggtcaatacggagaggagggac
ctcctggcagcccagagaatgaacagtccttacgctgcccggtcctggagacgaatctct
agcctagagtccgaggtgtga
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integrated database retrieval system
