Trachemys scripta elegans (red-eared slider): 117888291
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Entry
117888291 CDS
T07347
Name
(RefSeq) biotin--protein ligase-like isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00780
Biotin metabolism
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
117888291
Enzymes [BR:
tst01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
117888291
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
117888291
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
117888291
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
117888291
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Gene cluster
GFIT
Motif
Pfam:
Vps26
BPL_N
Arrestin_N
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
117888291
NCBI-ProteinID:
XP_034647448
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All DBs
Position
1:complement(163255838..163365112)
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AA seq
697 aa
AA seq
DB search
MGTALDIKIKRANKVYLCGEVLSGVVVITSKDAVQHQGVSLTMEGSVNLQLSAKSVGVFE
AFYNSVKPIQVINSTIEMVKPGKLPSGKTEIPFEFPLHMKGNKVLYETYHGVFVNIQSLD
DLNKWTLLLISPFIYSDKILDADHIAFVTESVSAKADDLQTSFSKKVVKWSDYCSPLAYK
PGEPYKLIAEASVDNFSNLGIAFMEDRLQMDNGMVPRKIVSVHLQESALKELERMAAPTE
EKISTNSAHMDELTPAPPFTTATQQGSVSADSTGGGDQEVREEKSRLEKRSEPHDEPNSL
SERETSTGKHHHLHLSSCHECFELENSTIESVRYASSENIPELPDDCSASMEEVTDDCLA
RELRRINLTGKPPNVLIYVGSDPMKIKFEKIKSVLKECIDTNHYAIYQLVEEQVLKAPWL
DNSLLLVIATEEPISKDNHKQFLTYLSKGGKILGLSASFTFGSIQIRSKSELKKTIQELV
FYKADNSEVKLNLLTSGSVFEQEVKENLSPVKSLSHLNNTDKDMIIVHLPYGDRGGESIL
CQVLCIYLEMDIASLTTQTEEDFNLLKMSNAKRYEVLKEILTLLLGLSCELSEVPSLTPI
YLLSSDEENHISFLKWLEKKVDVEGLIKSSKMTLKFVSSYKPEMEITQSLIPVVTVGGFS
SEHFSLQTYQHNLQTKKLGKIVLFAEVTSTTMNLLDG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgctctggacatcaagatcaaacgggccaacaaggtctatctctgcggggaa
gttctttctggagtggtggtcataacaagtaaggatgcagtccaacaccagggtgtctcc
ttaacgatggaaggatcagtaaatctgcagctcagtgccaaaagcgttggtgtgtttgaa
gctttctataactctgttaagcctattcaagttatcaacagtaccatagaaatggtaaaa
ccaggaaaacttcccagtggcaaaacagaaattccttttgagtttccattgcatatgaag
ggcaacaaagttctatatgagacatatcatggtgtgtttgtcaatattcagtccctggat
gacttaaacaaatggactctacttctcatatctccttttatttattctgataaaatactt
gatgcagaccatatagcatttgtgactgaaagtgtttctgccaaggcagatgatttacag
actagcttctcaaaaaaggttgtaaagtggtcagactattgttcaccattggcctataaa
cctggagaaccttataaactaattgctgaagcaagtgtggataacttcagtaaccttgga
atagcattcatggaagacagacttcaaatggataatggaatggtgcctcggaagattgtt
tctgtccatttacaggagtctgctctaaaggagctagagcggatggctgcacctacagaa
gagaagattagcactaatagcgcacacatggatgaattgacccctgctcctccatttaca
actgcaactcaacaaggatcagtgtcagctgactctacaggaggaggtgatcaggaggtg
agagaagagaaatccaggctggagaaaagaagtgagcctcatgatgagcctaacagccta
tctgaaagggagacaagtactggtaaacatcaccacctgcacctttccagctgccacgaa
tgctttgaacttgaaaacagcaccattgagtcagtcagatatgcttcatcagaaaacatt
ccagaacttcctgatgattgcagtgctagcatggaagaagttactgatgactgtctggca
agagaactaagaaggataaacctcactgggaagcctcccaatgtcttaatttatgtgggc
tctgaccctatgaaaatcaaatttgagaagataaaatcagtgctcaaggagtgcatcgat
acaaaccactacgccatctaccagctggttgaggaacaagttctgaaagctccctggctt
gataactcgttgttgttggttattgccacagaggaacccatttctaaggataatcacaaa
cagttcctgacctacttgtcaaaaggtgggaagattttagggctttctgcctcttttaca
tttggcagtatacagataaggagcaaaagtgaactgaagaagaccatccaagaattagtg
ttctataaagcagataacagtgaagttaaattaaaccttctgacgagtggcagtgttttt
gagcaagaggttaaagaaaatctcagcccagtgaagtcgttgagtcacttaaataataca
gataaagatatgatcattgttcacctgccatatggagatcgtggaggagaatccattctg
tgtcaggtactatgtatatacttggagatggatatcgcctctctgactacacaaaccgaa
gaagattttaatttactcaaaatgagcaacgccaagagatatgaagttcttaaggagatc
ctgacattattacttggactgagttgtgaattaagtgaagttccttcactaactcctatt
tatttgctctcttctgatgaggaaaatcatatttcttttctgaaatggcttgaaaaaaaa
gtagatgttgaaggattaataaaatccagcaagatgacccttaaatttgtctcatcttac
aagccggagatggaaataacacaatctctcataccagttgtcactgtgggaggcttctca
tctgaacacttcagcctgcagacataccaacacaatctgcaaacaaagaagcttgggaag
attgttctgtttgctgaagtcacatcaacaacaatgaatcttcttgatgggtaa
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