Candidatus Thiodictyon syntrophicum: THSYN_04775
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Entry
THSYN_04775 CDS
T05211
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy03030
DNA replication
tsy03410
Base excision repair
tsy03420
Nucleotide excision repair
tsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THSYN_04775
03410 Base excision repair
THSYN_04775
03420 Nucleotide excision repair
THSYN_04775
03440 Homologous recombination
THSYN_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsy03032
]
THSYN_04775
03400 DNA repair and recombination proteins [BR:
tsy03400
]
THSYN_04775
Enzymes [BR:
tsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THSYN_04775
DNA replication proteins [BR:
tsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THSYN_04775
DNA repair and recombination proteins [BR:
tsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THSYN_04775
NER (nucleotide excision repair)
GGR (global genome repair) factors
THSYN_04775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AUB80333
UniProt:
A0A2K8U421
LinkDB
All DBs
Position
complement(1097702..1100407)
Genome browser
AA seq
901 aa
AA seq
DB search
MAAKYPLILVDGSGYLFRAYHALPKLTNSQGEPTGALIGVLAMLRKLIEQHQPDFIGVVF
DAAGPTFRDALYPAYKATRPPMPADLRAQIAPLQEVIRAMGLPLLVIPGVEADDVIGTLA
TSAAAQGLRTLISTADKDMAQLVDDHVTLVNTMTDTLLDPDGVSAKFGVPPGLIVDYLSL
VGDAADNVPGVPKCGEKTAAKWLKEYGDLDGVVANAGRITGKVGEHLRAALGQLPLARQL
TTIKRDVALDLGPRDLIPAAPDTVALRHWYERLEARRLLATLDDAAGVLPTAPPASRPAA
DYDLVLTADAFADWVARLESADLFAFDTETTGLDYMSADLVGVSFAVAAGRAAYVPVAHC
YPGAPDQLSRATVLARLQPLLEDQSRAKVGQNLKYDMSVLARHGVTLRGIAHDTMLESYV
LDSTASRHDMDSLAKKYLDYDTVHFEDIAGKGAKQITFDQVPLEPAAHYAAEDADITLRL
HQSLWPRLQATGRLAALYQAFEMPLVPVLSRMERTGVRIDPNLLAVQSGELAQRIHDLEQ
QAYDTAGRRFNLGSPKQIGEIFFQELGLPVLVKTPTGAPSTAEEVLAQLADQGHALPRLI
LEHRGLSKLRSTYTDKLPKMINPDTGRVHTSYHQAVAATGRLSSSDPNLQNIPIRTEEGR
RIRQAFVAAPGYRILAADYSQIELRIMAHLSGDERLLAAFASGQDIHRATAAEVLGLSPE
AVTTEQRRSAKAINFGLIYGMSAFGLARQLGIDRGAAQEYVDRYFARYPGVRAFMDRIRA
QAREDRYVETLFGRRLYLTDIGHSNQARRAAAERTAINAPMQGTAADIIKRAMISLDGWI
EQERPPVRMIMQVHDELVFEVVAEAVDAVRGRIRGDMERAAELAVPLVVDLGVGADWDQA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaagtatccactgattctggtcgacggttcaggctatctgttccgcgcctat
cacgcgctcccgaagttgaccaactcccagggcgagccaaccggcgccctgataggggtc
ctcgccatgctgcgcaaactgatcgagcagcaccagcccgactttatcggggtggtcttc
gacgccgcgggtccgaccttccgcgacgccctctatcccgcctacaaggccactcgcccg
cccatgcctgcggacctgcgcgcgcagattgcgcccctgcaggaggtgatccgcgccatg
ggcctgccgctgctggtgatcccgggggtggaggccgatgacgtgatcggcaccctggcc
accagcgccgccgcgcagggcctgcggaccctgatctccaccgcggacaaggatatggcc
caactggtggatgaccatgtgaccctggtcaacaccatgaccgataccctgctcgacccg
gatggggtcagcgccaagttcggcgtaccaccggggcttatcgtcgattatctgagcctc
gtgggcgatgcggcggacaacgtccccggggtgcccaagtgcggcgagaagacggcggcc
aagtggctcaaggagtacggcgacctggacggggtcgtcgccaacgccgggcggatcacg
ggcaaggtcggggagcatctgcgtgccgcgctcgggcaactcccgctcgcccgccaattg
accacgatcaagcgggatgtggcgctcgacctggggccccgggacctgatccccgcggca
ccggacacagtcgccctgcgccactggtatgagcgtctggaggcccggcgcctgctcgcc
accctggatgacgcggctggggtcctgcccactgcgccgcccgccagtcgcccggccgcc
gactacgatctggtcctgaccgcggacgccttcgcggactgggtcgcccgcctggagtcc
gccgacctcttcgccttcgacaccgagaccaccgggctcgactacatgagcgcggacctg
gtcggcgtctccttcgcggtagcggccggccgcgccgcctatgtgccggtcgcccactgc
taccccggggcccccgaccagctcagccgcgcgacggtgttggcccgcctgcaaccgctc
ctggaggaccagtcccgcgccaaggtcggccagaacctcaagtacgacatgagcgtgctc
gcccgccatggcgtgaccctgcgcggcatcgcccacgacaccatgctggagagctatgtg
ctcgacagcaccgccagccgtcacgacatggactccctggccaagaaatacctggactat
gacaccgtccacttcgaggacatcgccggcaagggggccaaacagatcaccttcgaccag
gtcccgctggagcccgcggcccactacgcggccgaggacgccgatatcaccctgcgcctg
caccaaagcctgtggccgcgcctgcaggccaccggtcggctggcggcgctctaccaggcg
ttcgagatgccgctggtgccggtcctctcgcgcatggagcgcaccggcgtgcgcatcgac
cccaacctgctggcggtgcagagtggggaactggcccagcgcatccacgacctcgagcag
caggcctatgacaccgccgggcgccgcttcaacctgggttctcccaagcagatcggtgag
atcttcttccaggaactggggctgccggtgctggtcaagacccccaccggcgcgccctcg
accgcggaggaggtcctggcgcagctcgccgaccagggccatgcgctgccgcggctgatc
ctggagcaccgggggctgtcgaagctgcgctccacctacaccgacaagctccccaagatg
atcaacccggacaccgggcgggtccacacctcctatcaccaggcggtcgccgccaccggt
cggctctcctccagcgaccccaatctgcagaatatccccatccgcaccgaggaggggcgg
cgcatccgtcaggccttcgtcgccgcgcccgggtaccgcatcctggccgccgactattcc
cagatcgagctgcgcatcatggcccacctctccggcgacgagcgcctgctggccgccttc
gcgagcggccaggacatccaccgggcgaccgccgccgaggtcctggggctcagcccggag
gccgtcaccaccgagcagcgccgctccgccaaggccatcaacttcgggctcatctacggc
atgtcggccttcggcctggcccgtcaactcggcatcgaccggggggcggcccaggagtat
gtcgatcgttattttgcccgctaccccggggtgcgcgccttcatggaccgcatccgcgcc
caggcccgcgaggaccgctacgtggagaccctgttcggccgccgcctctatctcacggac
atcggccacagcaaccaggcgcgccgcgccgccgccgagcgcaccgccatcaatgccccc
atgcagggcacggcggccgacatcatcaagcgggccatgatcagcctggatgggtggatc
gagcaggagcgcccgcccgtgcgcatgatcatgcaggtccacgacgagttggtcttcgag
gtcgtcgccgaagccgtggacgcggtccgcgggcgcatccgcggcgacatggagcgggcg
gcggagttggcggtcccgctggtggtggacctcggtgtcggcgccgactgggatcaggcc
cactga
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