Thermococcus thioreducens: A3L14_03420
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Entry
A3L14_03420 CDS
T05104
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
ttd
Thermococcus thioreducens
Pathway
ttd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3L14_03420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttd03021
]
A3L14_03420
Enzymes [BR:
ttd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3L14_03420
Transcription machinery [BR:
ttd03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
A3L14_03420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
NOB1_Zn_bind
RNA_pol_Rpb2_45
DUF5816
Cys_rich_CPCC
Motif
Other DBs
NCBI-ProteinID:
ASJ11995
UniProt:
A0A1I0P9T2
LinkDB
All DBs
Position
complement(626035..629403)
Genome browser
AA seq
1122 aa
AA seq
DB search
MASRGPTVVDVTPDDLWLVMEAYWKEKGLVRQHLDSYNAFIDYGMQKVIDEFGGIKPDIP
DFEVRFGKVRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPLYLELIPVVNGIAQEAVEV
RIGELPIMLKSKACRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDLAPNKTLV
ERDQRQNRVIAKCFSYRHGYRALITVERRKDGILYVNIPNVPRPVKFVYVMRALGILSDK
EIVEAVSDDPRIQQVLFDNLEDASDITSQEDALDYIGKLALPGQPKEYRLRRAQHIIDNN
LLPHMGVEEKDRRAKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLKLAGDLLRDLFRV
AFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSIRPDVLSERIEHALATGAWPGGRT
GVSQLLDRTNYMSTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVK
NLALMAQITTGIPEEEAREYLNRLGVIPIEEQRPNPNLWRVYLNGVLIGTVEDGESLVNR
IRTDRRSGRISDAINVALYQDEEVREIYVNSDDGRVRRPLIIVEKGKPKLTKDHIEGIKN
GTLNWSDLVKMGVIEYLDAEEEENAYVATWPWEVTEEHTHLELMPAAILGIPASLVPYPE
HNAAPRNTYGAGMAKQSLGLGWANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAG
QNFVVAVLSYSGYNMEDAVIMNKASIERGLARSTFFRTYEAEEKRYLGGQTDRFEVPDPT
IQGYLGEKYYRHLDEDGIIFPESKVEGKDVLVGRTSPPRFLEEQSGLGGIILQERRETSV
AVRPSERGIVDKVIITETGDGTKLVKITVRDLRIPEFGDKFASRHGQKGVIGLIVPQEDM
PWTESGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVASLKGRRVDGTAFIGEPEERLRKEL
EELGFKHSGREVMYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPT
EGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKV
YCPVCGEEEKISKVEMSYAFKLLLDELKAMGIRPSLNIVDRV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaccgaccgttgtggacgttactcctgacgacctctggctcgttatg
gaagcgtactggaaggagaaaggactcgtcagacagcaccttgactcttacaacgccttc
atcgactacgggatgcagaaggtcatagacgagttcggcggcatcaagccggacattccc
gattttgaggttaggtttggaaaggttcgcctcggcgagcccgaattccaggaagcccaa
gggcagagaaagcccctctacccgatggacgcgaggatcagaaacctgacctattctgct
ccgctttatcttgagctcattcccgtcgttaacggcatcgcccaggaagccgttgaggtg
cgcataggtgagctcccgataatgctcaagtccaaggcgtgcaggctttacggcctcagc
gacgaggagcttataaaactcggcgaggacccgaaggatccgggagggtactttatcatc
aacggttccgagagggtcatcgtctctatcgaagacctcgccccgaacaagacccttgtt
gagagggaccagaggcagaacagggtgatagccaagtgtttctcctacaggcacgggtac
agggctctaatcaccgtcgagaggagaaaggatggaattctctacgtcaacattccaaac
gttcccaggccggttaaattcgtctacgtcatgcgcgctcttggtattctcagcgataag
gagatagtcgaggctgtgagcgacgacccgcgcatccagcaggttctcttcgacaacctt
gaggacgcgagcgacataaccagccaagaggacgctctcgactacataggcaagcttgcc
ctccccggccagccaaaggagtacaggctcaggagggcccagcacatcatagacaacaac
ctcctgccccacatgggcgttgaagagaaggacaggcgcgccaaggcatactacctcggc
atgatggccctcaaggttctggagctttccctcggcctccgcggtgaggacgacaaggac
cactacgcaaacaagaggctcaagctcgctggagaccttctcagggacctcttccgcgtc
gccttcggccagctcgttaaggacatgcagtaccagatgaccaagacctaccagagaaag
ggtgagcgctacaccttcgagaacatccagaggtttgtgaggaactcgataaggcccgac
gttctcagcgagaggattgagcacgctttagcgaccggtgcctggccgggtggaagaaca
ggtgtgagccagcttctcgacagaaccaactatatgtcgaccctctcccacctcaggcgc
gttacttccccgctcagcagggaccagccccacttcgaggctcgtgatttgcacggaacc
cactggggtaggatatgcccgacggagactccggaaggtccgaactgtggtctcgtcaag
aacctcgccctgatggcccagataaccacaggaatccccgaggaagaagccagggagtat
ctcaacaggcttggggttatcccgatagaggaacagaggccgaatccaaacctctggcgt
gtctacctaaacggtgttctcatcggaaccgttgaggacggagaaagcctcgtgaacaga
ataagaaccgacaggagaagcggaagaataagcgacgcaatcaacgttgccctctaccag
gacgaggaggttagggagatatacgtcaacagcgacgacggcagggttagaagaccgctc
atcatagttgaaaaaggcaagccaaagctcaccaaggatcacatcgaaggaataaagaac
ggcaccctaaactggagcgacctcgtcaagatgggtgttatagagtacctcgacgccgaa
gaggaggagaacgcctacgtcgcgacatggccgtgggaagttaccgaggagcacacccac
cttgagctcatgcccgcggcaatactcggtatccctgcctcactcgttccgtatcctgag
cacaacgccgctccgcgtaacacctacggtgccggtatggccaagcagagcctaggtctc
ggctgggcaaacttcaggatccgcgttgacacccgcggtcacctcatgcactacccgcag
gttccgctcgtcaactcgaggataatgaaggccgtcggttttgaggagagacctgccggt
cagaacttcgtcgttgctgtcctcagctactcaggatacaacatggaagatgcagtcatc
atgaacaaggcctcgatagagcgcggtcttgctcgctcaaccttcttcagaacctacgag
gccgaggagaagaggtatttgggcggtcagaccgaccgcttcgaggtccctgacccaacc
atacaaggctatctcggtgagaagtactacaggcacctcgatgaggacggtataatcttc
cccgagtcaaaggttgagggtaaagacgtcctcgttggaagaacatcaccgccgaggttc
cttgaggagcagagcggcctcggaggcataatcctccaggagaggcgtgaaaccagcgtt
gctgtgaggccaagcgagaggggcatagtagacaaggtcatcatcaccgaaaccggcgac
ggaaccaagctcgtcaagataaccgtcagggatctccgcatccccgagttcggagacaag
ttcgcatcaaggcacggacaaaagggtgtcatcggtctaatcgtcccacaggaggacatg
ccctggaccgagagcggaatcgtcccagacctcatagtcaacccgcacggtatcccgagc
cgtatgaccgttggacagctcatcgaggccataggcggaaaggttgcctcgctcaaggga
agaagagttgacggcacagcattcattggagagcctgaggaaaggctcaggaaggagctg
gaggagcttggattcaagcacagcggaagggaagtcatgtacgacggcataaccggaagg
cgccttgaggcggatatattcgtcggcgtcatctactaccagaggctccaccacatggtc
gccgacaagatgcacgcgcgctcaaggggtccggtgcaggttctcaccaagcagccgacc
gagggaagggcaagggaaggtggtctcaggttcggtgagatggagcgtgacgtcctcatc
ggtcacggcgccgcgatgctgctcatagagcgccttttggaggagagcgataagaccgag
gtatgggtctgcgagagctgtggacatctggcactcgaagacaagcgcagaggaaaggtc
tactgccctgtctgcggagaggaagagaagataagcaaggtggagatgagctacgccttc
aagctactgctggacgagctgaaggcgatgggaataaggccgtctctcaacatagttgat
agggtgtga
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