Thermothielavioides terrestris: THITE_2110899
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Entry
THITE_2110899 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THITE_2110899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2110899
Enzymes [BR:
ttt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THITE_2110899
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
THITE_2110899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
11515704
NCBI-ProteinID:
XP_003650936
JGI:
Thite2_2110899
UniProt:
G2QV02
LinkDB
All DBs
Position
1:join(9287312..9287400,9287480..9287591,9287646..9292088)
Genome browser
AA seq
1547 aa
AA seq
DB search
MATQQKARRHNEQVVDQVPKRFKALKFGIQSHQDIVSQGVLEVSDNLLYDVENRRTAFPH
GPLDPRLGTSSTNRENKCSTCHLGLQECPGHFGHVRLPLPVFHIGYLKYIQATLQNICKD
CARVLLQEPERRQFLKELRRPGIDNLRRSAILKRINEQCRKAKTCPYCGSIQGVIRKLSV
MKLVHDKYAAYNKSTAQKKIAPQSKLEFDASFEQAKKYTPELEKHTRKAMDDLNPLKVLN
LFKQISPSDCEFLGLDPAEGRPEMFLWQYVPAPPICIRPSVAQENASNEDDITSKLSEII
LYAGHLRESMKKGVALPVIMEQWEFLQLQVGMYVNSDVPGLYQPGFGKPIRGFCQRLKGK
QGRFRGNLSGKRVDFSGRTVISPDPNLSIEQVAVPQLVAKNLTYPERVNHANIEKLRERV
INGPHIWPGAQGIIKKDGSKYNLKIGKESLRERHADNLEFGDVVERHLEDDDIVLFNRQP
SLHKLSIMSHLVKVRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVK
HNLITPKNGEPIIAATQDFITAAFLLSSKDRFFDRTTFTYICTQMLLGDTYLELPPPAII
KPRALWTGKQIFNVMMRPNKESPVLVNLDAKNKAFQKKQDGEIPDMDIDDAFLVVRNSEV
MCGRMDKSTVGGGKKNSVFYVILRDFGPEYAAAAMNRLAKLSARTLTLRGFSIGVGDVWP
SDSLTAHKASLVEDAYKKCDDLIETYRQGKLEKAPGCNLEETLENIISGILSKVRQQAGN
YCVDNLSKNNAPLIMAKSGSKGSEINVAQMVACVGQQIISGKRVPDGFQDRSLPHFHKNA
RQPPSKGFVRNSFYTGLVPTEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSAQ
YDDTVRTSEGGIVQFQYGADRLDPVDMEGDAKPVDFARTWNHAQSITWSNSEPSLLPWEV
QELCKTILDAERKKYVRRHLVTNEEIKYDDDTIRQSMDHDVLIAIDEHESVRVFLNTIHD
YVRERALKLAKARKAVGLDPCIPPTDQRMREAIDKWEPATKGGSETGMHALGEPRDPSEY
VLKDLRRKVDGEDEFGDAARAKAQAHVDRVAKVSERTLRTFIQMCLHKYRRARVEPGHAV
GAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKLISTPVITCKLENKW
DIKAARVVKGRIEKTYISDVISYIDDEWLPDVAKIVLQVDVQALSDMQLGITTKDIADAI
VRAKKLKLKVEPEDLRISANRVEVVVRNTWQDVTAARKAARARAAAIEKGQHVSSATDES
AADFQLRVNFLKRMLPHVAISGYPEAARAIIQTSDANEHEVLVEGYGLRACMTTEGVIGT
QCVTNSVMECRDVLGIEAARTTIAKEIGQVMSSMSIDPRHMELLADVMTYKGEVLGITRF
GLAKMRDSVLQLASFEKTPDHLFDAAAGMKKDRIQGVSECIIMGQTMSIGTGAFQVVRRL
GIRDHQIARRPTLFEDAWKKDEAAKRKLRLAKRRSGPEQAGMVAVAG
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcaacagaaagcccgccgacacaatgaacaggtggtcgatcaggtgccaaaa
cgcttcaaggcgctcaaattcggcattcagtcgcaccaagatatcgtaagccagggcgtt
ctcgaggtctcggataacctgctctacgatgtcgagaaccggcgaacggcgtttccccat
ggcccgctcgatccgcggctgggaacgtcgagcacgaatcgagaaaacaaatgcagcacg
tgccaccttggacttcaagagtgccctggtcatttcggccacgttcgattaccgctgccg
gtcttccacatcggttatctcaaatacatccaggcgacgctgcaaaacatttgcaaggac
tgcgccagggtcctcctgcaggagcccgaacggcgccagtttttgaaggagctgcgccgt
cccggcattgacaatctgcggcggtcggccatcctcaaacgaatcaacgagcagtgcagg
aaggcgaagacctgcccgtactgtggctcgatccagggtgtgattcggaaacttagcgtc
atgaagcttgtccacgacaagtatgcggcctacaacaaatcgacggcccagaagaagatc
gccccgcagagcaagctcgagttcgatgcgtcgttcgagcaggctaagaaatacacgcct
gagctggagaaacacacgcgcaaggcgatggatgacttgaacccgctcaaagtcctgaat
ctcttcaagcaaatcagcccgagcgattgcgagttcctcggactggatcccgccgagggc
cggccagaaatgttcctctggcaatacgtccctgcgccaccaatctgcatcagaccgtcc
gtcgctcaggaaaatgcgagtaacgaggacgacattaccagcaagttgtcggaaatcatc
ttgtatgccggccatctgcgggagtcgatgaagaaaggagtagcgttgcctgtcatcatg
gagcagtgggagtttctgcagctgcaggtgggcatgtacgtcaacagcgatgtgccgggc
ctctaccagcccgggttcggcaagcccattcgcgggttttgccagcgcctcaagggcaaa
cagggccgattccgtggcaacctctccggaaagcgtgtcgacttttccggtcgaacggtc
atctcgcctgatcccaacctgagcatcgagcaagtagcggtccctcagctcgttgccaag
aacttgacatacccagagcgcgtgaatcacgccaacattgagaagctgagggagcgtgtc
atcaacgggccacacatctggcccggagcccagggcatcatcaagaaagacggctccaag
tacaacctcaagatcggcaaggagagtctccgagagcggcacgcagacaacctggaattc
ggcgatgtcgttgagcgccacctcgaggacgacgatattgttctgttcaaccggcagcct
tccttgcacaagctcagcatcatgagccatctcgtcaaggtccggccctggaggacgttc
cgtctcaacgagtgtgtctgcaccccgtacaacgctgatttcgatggcgacgagatgaac
ctgcacgtcccgcagacggaggaggcccgggcggaggccatcaacctgatgggggtcaag
cacaatcttattacgcccaagaacggcgagcccatcattgctgccacgcaggatttcatc
acggcagcattcctgctaagtagcaaggaccgcttcttcgaccggacgacgttcacctac
atctgcacccagatgctcctgggtgacacatacctcgagctccccccgcccgccatcatc
aagccaagggcgctctggacgggcaagcaaattttcaacgtcatgatgcggcccaacaaa
gaatccccagtccttgtgaacctcgacgcgaaaaacaaagctttccagaagaaacaggac
ggcgagattccagacatggacattgacgacgccttcctggtcgtccgcaactcggaagtc
atgtgcgggaggatggacaagtcgacggtcggaggcggcaagaaaaactcggtcttctac
gtgatccttcgagattttggaccggaatatgctgctgctgccatgaatcgcctggccaag
ctcagcgccagaaccttgaccctgcgcggcttctccatcggcgtcggcgacgtgtggcca
tctgattctttgacggctcacaaggcgagcctcgtagaggacgcatataagaagtgcgac
gacctcatcgagacctacaggcaaggcaaactcgaaaaggccccgggctgcaacctcgag
gagactctcgaaaacatcatctcgggtattctcagcaaagtccgacagcaggcgggcaac
tactgcgtcgacaacctgagcaagaacaatgcgcccctgatcatggccaagtcgggttcc
aagggctccgagatcaacgtcgcccagatggttgcttgcgtcggtcagcagattatctcg
ggcaagcgtgtgccagatgggttccaggaccgcagtctgccgcacttccacaagaatgcg
cgccagcctccctccaagggcttcgtccggaacagcttctacaccgggctcgtcccgacc
gagttcctcttccacgccatctccggcagagagggtctcgtcgatacagccgtcaagacg
gctgagacgggctacatgtctcgacggctgatgaagtcgctggaagacctctcagcgcag
tacgacgacacggtccgtacgtcggagggcggaatcgtgcagttccagtatggcgcggac
aggctggatcccgtcgacatggaaggcgatgcgaagcctgtcgacttcgccaggacttgg
aatcacgcgcaaagcatcacgtggagcaactcggaaccttcactgctgccatgggaggtc
caagaactgtgtaaaaccatcctcgacgcagagaggaagaagtacgtcaggcgacacctc
gtcacgaacgaggagatcaagtacgacgacgacacgattcgccagagcatggaccatgac
gtcctaattgccattgatgaacacgagagcgtgcgggttttcctcaatacgatccacgac
tacgtgagagaacgagctttgaagctggcaaaggcacgcaaagcagttgggctggatccg
tgcattccgccaaccgaccagaggatgcgagaggcgattgacaagtgggagccggcgacc
aagggcggctcggaaacggggatgcacgcgcttggcgagccgcgcgatccgtccgagtac
gtcctcaaggatctacggcgaaaggtcgatggcgaggatgagtttggtgacgcagctcga
gccaaggcacaggcgcacgtcgaccgggtggccaaggtgtcggaacgtacactgcgaaca
tttatccagatgtgcctccacaagtacaggagggcgcgggtcgagccgggtcatgccgtg
ggagcggtgggggcgcagtcgatcggcgagccgggcactcagatgacactgaagacgttc
cactttgcgggtgtcgcgggtatgagcatcacgcagggtgtaccccgtatcaaggaaatc
atcaacgcatccaagctcattagcacgcccgtcatcacgtgcaagctggagaacaagtgg
gacatcaaggcggcgcgcgtggtcaaggggaggatcgaaaagacatacatctcggatgtc
atctcgtacattgatgacgagtggcttccggacgtggccaagatcgtgctgcaagtcgac
gtccaggccttgtccgacatgcagctcggcatcacgacaaaagatatcgcggatgccatc
gtccgggccaagaagctgaagctcaaggtggagccagaagacctcaggatcagcgccaac
cgcgtcgaggtggttgtgcgcaacacgtggcaggatgtcacggcagcccggaaggcggcg
cgggcccgggccgcggccatcgaaaaggggcagcacgtgtccagcgcgacggacgaatcg
gccgccgacttccagctgcgggtcaacttcctcaagcgcatgctgccgcacgtggccatc
tcgggctacccggaggcggcgcgggcgatcatccagacgagcgacgcgaacgaacacgag
gtgctggtcgaagggtacgggctccgggcgtgcatgacgacggagggggtgatcggcacg
cagtgcgtgaccaactcggtcatggagtgccgcgacgtgctgggcatcgaggcggcgcgc
acgacgatcgccaaggagatcggccaggtcatgtccagcatgagcatcgacccgcgccac
atggagctgctggccgacgtgatgacgtacaagggcgaggtcctgggcatcacgcggttc
gggctggccaagatgcgcgacagcgtcctgcagctggcctcgttcgagaagacgccggac
cacctgttcgacgcggccgcgggcatgaagaaggaccgcatccagggcgtcagcgagtgc
atcatcatggggcagaccatgtccatcggcaccggcgcgttccaggtcgtgcgcaggctg
ggcatcagggaccaccagatcgcccgccggccgacgctgttcgaggacgcatggaagaag
gacgaggccgccaagcggaagctgaggttggcgaagcggaggagcgggccggaacaggcc
gggatggtagctgtggctggttaa
DBGET
integrated database retrieval system
