Thermothielavioides terrestris: THITE_2110960 Help Entry THITE_2110960     CDS       T02228                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism ttt  Thermothielavioides terrestris Pathway ttt03020   RNA polymerase ttt03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ttt00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     THITE_2110960   09124 Replication and repair    03420 Nucleotide excision repair     THITE_2110960  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ttt03021]     THITE_2110960    03400 DNA repair and recombination proteins [BR:ttt03400]     THITE_2110960 Enzymes [BR:ttt01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      THITE_2110960 Transcription machinery [BR:ttt03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      THITE_2110960 DNA repair and recombination proteins [BR:ttt03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       THITE_2110960 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_5 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 Motif Other DBs NCBI-GeneID:  11515389 NCBI-ProteinID:  XP_003651004 JGI:  Thite2_2110960 UniProt:  G2QVH8 LinkDB All DBs Position 1:join(9465344..9469029,9469107..9469269) Genome browser AA seq 1282 aa AA seqDB search MADYATQGQYGGGYADGYDNDDRYDVEGGFDDGTALGGEDSITPEDCWEVISSYFDMKGL VSQQIDSFDEFTTTTIQSLVDEYADLTLDHPNPGDDSGRDIAMRRYDIHFGNVMISKPTL TETTGETTVLLPYECRDRNLTYSAPMYCRVSKRARVAVNEEVRLEDMDDDQRAYMAQTGE VPKTIRWEEEDTGPREGIAKGDDDEQGDLIFLGKLPVMVKSQVCHLHGEDDESLFQLNEC PYDQGGYFIINGSEKVLIAQERSAANIVQVFKKPPGGSVSYQAEIRSALEKGSRLISSLQ MKLHTKASPDKGRQANTVSVTLPYVREDVSLAIVFRALGIVSDEDILNHICYDRSDTQML EALRPCIEEAFCIQDREIALDFIGKRGNGNAGQNRSNRIRAAKDLLQKEMLPHISQTEGC ETRKAFFLGYMVHKLLQCALGRRDTDDRDHFGKKRLDLAGPLLAKLFRGIIRRMTQDLMS YMKRCIDTNKNFSLALGIKHSTLTNGLKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFAS TLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMCYVSVGTP AEPIVEFMIARNMEVLEEYEPLRYPNATKVFVNGTWVGVHQDPKHLVSLVQGLRRKNVIS FEVSLVRDIRDREFKIFSDAGRVMRPLFTVEQEDNGANGVEKGQLILNKEHIQRLEADKE LGKYHPDYWGWKGLLRSGAIEYLDAEEEETAMICMSPEDLDMFRLSKMGFNVTDTSGQGN SRIRTKINPTTHMYTHCEIHPSMLLGICASIIPFPDHNQSPRNTYQSAMGKQAMGFFLTN YSRRMDTMANILYYPQKPLATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQS SIDRGLFRSLFFRSYTDCEKRVGINIIEKFEKPNRSDTLRLKHSTYDKLDMDGIVAPGVR VSGEDIIIGKTCPINPENAELGQRSTQHVKRDASTPLRSTESGIVDSVILTTNQDGMRYV KVRVRTTKIPQIGDKFASRHGQKGTIGVTFRQEDMPFTCEGITPDIIINPHAIPSRMTIA HLIECLLSKVSTLKGMEGDATPFTEVTVDSVSALLREHGYQSRGFEIMYHGHTGRKLRAQ VFFGPTYYQRLRHMVDDKIHARARGPLQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAA SFLKERLFEVSDAFRVHICEICGLMTPIANLTKQSFECRPCKNKTKIAQVHIPYAAKLLF QELMSMNIASRMFTSRSGISVR NT seq 3849 nt NT seq  +upstreamnt  +downstreamnt atggctgactacgcgacccaaggccagtacggcggcggctacgccgatggatacgacaat gacgatcgctacgatgtcgagggcggtttcgatgacggcacggccctgggcggcgaggac agcatcacgcccgaagactgctgggaggtcatttcttcctactttgacatgaagggcctc gtctcgcagcagatcgactcgttcgacgaattcacgacaaccaccatccagtctctcgtc gacgaatatgccgatctgactctggaccacccgaatcccggcgacgacagcggccgtgac attgcgatgcgccgctacgacatccatttcgggaacgtcatgatttccaagccgaccctt accgagacgacgggtgaaaccaccgtgctgcttccgtacgaatgccgcgaccgcaacctg acatattctgcacctatgtattgcagagtctcgaagcgcgcccgtgtcgctgtcaacgag gaagtgcgcctggaggacatggacgacgaccagcgtgcgtatatggcccagacgggcgag gtccccaagacgatccggtgggaggaagaagacactgggcctcgagagggcatcgccaag ggagatgatgacgagcaaggcgacttgattttcctcggcaagctccccgtgatggtcaag tcgcaggtctgccacctgcacggcgaggacgacgagtcgctctttcagctcaatgagtgc ccgtatgaccaaggcggctacttcatcatcaacggaagcgaaaaagtcctgattgctcag gagcgctccgccgccaatatcgtccaggtgttcaagaagcctccgggaggcagcgtctca tatcaggccgagatccggtccgcgctcgagaaaggctcgcgactcatctcgtctctgcaa atgaagctgcacacgaaggcctcgcccgataagggaaggcaagccaacactgtcagcgtc acgctgccatacgtccgagaggatgtgtcgctcgccatcgtcttccgcgcgctcggcatc gtctccgacgaagatatcctgaaccacatctgctatgatcggtccgacacgcagatgctc gaggcgctgcggccgtgcatcgaagaagccttctgcatccaggaccgggagattgcgctc gactttatcggcaagcgaggcaacggcaacgccggacagaaccgctcaaaccggattcgg gctgccaaggacctgctgcagaaggaaatgttgccccacatctcgcaaacggagggctgc gagacgaggaaggccttcttccttggctacatggtgcacaagctactccaatgcgcgctt ggccgccgggacacggacgaccgcgatcacttcggcaagaagaggctagatctcgcgggc cctctgctggccaagctcttccggggcattatccgccgcatgacgcaggacctgatgtcc tacatgaagcgctgcatcgacacgaacaagaacttctccctcgccctgggcatcaagcac tccacgctcaccaacggcttgaagtactcgctggccacgggcaactggggcgaccagaag aaggcgatgagctcgacggccggagtgtcgcaggtgctgaaccgatacaccttcgcttcg acgctgtcgcatttgaggaggaccaacacgccgatcgggcgcgacggcaagctcgcgaaa ccccgccagcttcacaacacgcactggggcttggtctgccccgccgaaacgcccgaaggg caagcctgcggtctcgtcaagaacctgtcgctgatgtgctacgtcagcgtgggcacgccg gcggagcccatcgtcgagttcatgatcgcgcggaacatggaagtgctcgaggagtacgag cctcttcggtaccctaatgcgaccaaggtctttgtcaacggcacgtgggtcggcgtccac caggatccaaagcaccttgtgtcgctggtgcagggtctgaggagaaagaacgtcatctct ttcgaggtctcgctggttcgggacattcgtgaccgcgagttcaagatcttctcagacgcc ggccgcgtcatgaggccgctcttcaccgtggagcaggaagacaacggcgcaaacggtgtc gagaagggccagctgattctgaacaaggagcacatccagcgcctggaggcggacaaggaa ttaggtaaataccaccccgactactggggctggaagggtctcctgaggtcgggtgcgatc gagtacctcgacgcggaggaggaggagacggccatgatctgcatgagcccggaagatctc gacatgttccgcctcagcaagatgggcttcaacgtgaccgacacgtccggccaaggcaac agccggatcaggaccaagatcaacccgacgacccacatgtacacgcactgcgagatccac cccagcatgctgctgggcatctgcgccagtatcatcccgttcccagaccacaaccagtcg cccagaaacacgtaccaatcggccatggggaagcaagccatgggcttcttcctcaccaac tactcgcgccgcatggacacgatggccaacatcctctactacccgcagaagccgctggcg acgacgcggtcgatggagttcctcaagttccgggagctgccggccgggcagaacgccatc gtcgccattgcctgctactcgggctacaaccaggaagactcggtgattatgaatcagagc agcatcgaccgcggcctcttccgcagtctcttcttccggtcgtacacggactgtgagaag cgcgtgggcatcaacatcatcgagaagtttgagaagcccaaccgcagcgacacgctccgg ctgaagcacagcacgtacgacaagctcgacatggacggcatcgtcgcgcccggcgtccgc gtttccggggaggacatcatcatcggcaagacgtgccccatcaaccccgagaatgccgag ctcggccagcgctcgacgcagcacgtcaagcgcgacgcctcgacgccgctgcgcagcacc gagagcggtatcgtcgactcggtcatcctgacgaccaaccaggacggcatgcgctacgtc aaggttcgggtgcggacgaccaagatcccgcagatcggagataagttcgcgtcccgccac gggcagaagggcaccatcggcgtcacgttccggcaggaggacatgccgttcacgtgcgag ggcatcacgcccgacatcatcatcaacccgcacgccatcccgtcgcgcatgaccatcgcc cacttgatcgagtgcctgctgtccaaggtgtcgacactcaagggcatggagggcgatgcg acgccgttcaccgaggtgacggtcgactcggtgtcggcgctgctgcgcgagcacggctac cagtcgcgcggcttcgagatcatgtaccacggccacacgggccgcaagctgcgggcgcag gtcttcttcggcccgacctactaccagcgcctgcggcacatggtggacgacaagatccat gcgcgggcgcgcggcccgctgcagatcatgacgcggcagccggtcgagggccgcgcgcgc gacggcggcctgcgcttcggcgaaatggagcgcgactgcatgatcgcccacggcgccgcc agcttcctcaaggagcgcctgttcgaggtctcggatgccttccgcgtgcacatctgcgag atctgcgggctcatgacgcccattgcaaacctgaccaagcagtcgttcgagtgccggccc tgcaagaacaagaccaagatcgcgcaggtgcacatcccgtacgcggccaagctgctcttc caggagctcatgtccatgaacatcgcctcgcgcatgttcaccagccggtcgggcatctcg gtgcgctag

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