Thermothielavioides terrestris: THITE_2114661
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Entry
THITE_2114661 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THITE_2114661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ttt03019
]
THITE_2114661
Enzymes [BR:
ttt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
THITE_2114661
Messenger RNA biogenesis [BR:
ttt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
THITE_2114661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
AAA_16
AAA_33
AAA_18
AAA_22
SRP54
nSTAND3
Dynamin_N
AAA_19
AAA_5
cobW
FtsK_SpoIIIE
CbiA
AAA_28
AAA
ABC_tran
MeaB
AAA_30
AAA_24
KTI12
AAA_17
NTPase_1
AAA_11
Mg_chelatase
AAA_25
Rad17
NACHT
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
11514860
NCBI-ProteinID:
XP_003652857
JGI:
Thite2_2114661
UniProt:
G2R124
LinkDB
All DBs
Position
2:join(6012380..6012415,6012501..6013449,6013513..6013779,6013845..6014113)
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AA seq
506 aa
AA seq
DB search
MSIPGLGQIPSQPAAPTTRTITLQPFWEWRFEVPHTLNTSSSSAPISTTITSSSSSGSAA
SANTPTVRLVSGTAERDGTELAQNRAYALPRNCKSKILTYTGAVLEVAGPACDGYVARCA
APQDSPQLAVLNLHFALRARRQAASAAAAAAAAGHDTGGGGGKASVAAAPSPVPGPRVMV
CGPPGSGKTTVVRTLAALATRAGAQPLVANVDPAEGLLALPGTVSAAVFGTVMDVEDAAG
GFGVSATPSSGPSAVPVKLPIVYYFGREKVEHDAPLWRDLTAKLASSVRARFAADEAVRE
TGLLLDTPGVTVAKADMEMLLHAVREFAVNIVVVMGSAGIHAELQRRLENEKTTHGEAIT
LVLLEKSDGVAERDKEFMKFAREAAIKEYFFGDAKRTLSPFTQSVSFDDVAIFKTPDETD
FYDVPQGLEPAEISAEMSHWTLAVMNASVNDPPETIQQAPVMGFVAVADVDEDRRRLKIL
SPVSGRLGNRPMVWGRWPEPYINLVG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccaggcctgggtcagatcccttctcagcccgccgcccccacaacccgcacc
ataaccctgcagcccttctgggaatggcgcttcgaagtgccgcacaccctcaacacctcc
tcctcctccgccccgatctccaccaccatcaccagctcctccagcagcgggagcgccgcg
agcgcgaacaccccgacggtccgcctcgtctcgggcaccgccgagcgcgacggcaccgag
ctggcccagaaccgcgcctacgccctgccgcgcaactgcaagtccaagatcctcacctac
acgggcgccgtgctggaggtggccggcccggcctgcgacgggtacgtggcgcggtgcgcc
gcgccgcaggactcgccgcagctggccgtgctgaacctgcactttgcgctgcgggcccgg
aggcaggcggcttcggctgctgctgcggccgcggctgcagggcatgataccggcggcggc
ggcgggaaggcatcggtggcggcggcgccgtcgccggtgcccggcccgcgcgtgatggtg
tgcggcccgccgggcagcggcaagacgacggtggtgcggacgctggcggcgctggcgacg
cgcgcgggcgcgcagccgctggtggccaacgtcgacccggccgagggcctgctcgcgctg
cccggcacggtgagcgcggccgtgttcggcaccgtcatggacgtcgaggacgccgccggc
ggcttcggcgtcagcgccacccccagcagcgggcccagcgccgtgcccgtcaagctgccg
atcgtgtactactttgggcgggaaaaggtggagcacgacgcgccgctgtggagggatctc
acggccaagctggcgagctcggtcagggcaaggtttgcagcggatgaggctgtcagggag
accgggctgttgctggatactcccggcgtgacggtggcgaaggcggatatggagatgctt
cttcatgccgtccgcgagtttgccgtgaacatcgtggtggttatgggctccgctggcatc
cacgccgagctgcagcgccggttggagaatgaaaagacgacacacggggaagctattacg
ctggtgctgttggagaagtctgacggtgtggctgagcgggacaaggaatttatgaaattc
gcccgcgaagcagcgattaaggagtatttcttcggcgacgcgaagcggacgctcagcccg
ttcacgcagtctgtcagctttgacgacgtggccattttcaagactcccgatgaaaccgac
ttctacgatgtcccgcagggtctcgagccagccgagatctcggcggagatgtcgcactgg
actctcgccgtcatgaacgcctcggtgaacgacccgcccgagactatccaacaggcgccc
gtcatggggtttgtggctgtggccgatgtggacgaggacaggcggcggctgaagatcctc
tctcccgtcagtggccggctggggaacaggcccatggtctggggacgctggccggagccg
tacatcaacctggtagggtaa
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