KEGG   Thermothielavioides terrestris: THITE_2119818
Entry
THITE_2119818     CDS       T02228                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ttt  Thermothielavioides terrestris
Pathway
ttt03020  RNA polymerase
ttt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ttt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THITE_2119818
  09124 Replication and repair
   03420 Nucleotide excision repair
    THITE_2119818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ttt03021]
    THITE_2119818
   03400 DNA repair and recombination proteins [BR:ttt03400]
    THITE_2119818
Transcription machinery [BR:ttt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     THITE_2119818
  RNA polymerase III system
   RNA polymerase III
     THITE_2119818
  RNA polymerase I system
   RNA polymerase I
     THITE_2119818
DNA repair and recombination proteins [BR:ttt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      THITE_2119818
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 11524492
NCBI-ProteinID: XP_003655760
JGI: Thite2_2119818
UniProt: G2R8X4
LinkDB
Position
4:complement(join(3172772..3172808,3172882..3173001,3173108..3173419,3173491..3173525))
AA seq 167 aa
MSDYGDDDHEPLNDEPAFDDDVDEYYEPEPEPADEDEAARAPEQEGEAADSGEDHRNGGA
GNVVVSGDPNAAANSGRGSDKSHKDKKIPNDQRTTTPFMTKYEKARILGTRALQISMNAP
VLVDLEGETDPLQIAIKELREKKIPLIVRRYLPDGYYEDWTCEELLQ
NT seq 504 nt   +upstreamnt  +downstreamnt
atgtctgactacggcgacgacgaccacgagcctctcaacgatgagccggccttcgacgac
gacgtagacgagtactacgagccggagcccgagccggcggacgaggacgaggcggcgcgc
gcgcccgagcaagagggcgaggctgccgacagcggcgaagaccaccgtaacggcggcgcc
ggcaacgtggtcgtgtcgggcgaccccaatgcggcggccaactcgggccggggcagcgac
aagtcgcacaaggacaagaagatccccaacgaccagcgcacgaccacgccgttcatgacc
aaatacgagaaggcgcgcatcctggggacgcgcgcgctgcagattagcatgaacgcgcct
gtcttggtcgacctcgagggcgagaccgacccgctgcagattgccatcaaggagctgagg
gagaagaagatccccctgattgtgcgccggtacctgccggatggatactacgaggattgg
acgtgtgaggagctgctgcaatga

DBGET integrated database retrieval system