Tepidimonas taiwanensis: LCC91_04220
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Entry
LCC91_04220 CDS
T07546
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ttw
Tepidimonas taiwanensis
Brite
KEGG Orthology (KO) [BR:
ttw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ttw03009
]
LCC91_04220 (rimO)
Enzymes [BR:
ttw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LCC91_04220 (rimO)
Ribosome biogenesis [BR:
ttw03009
]
Prokaryotic type
ribosomal protein modification factors
LCC91_04220 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UBQ06309
LinkDB
All DBs
Position
914153..915562
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AA seq
469 aa
AA seq
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MSTTVTEHAPAAAPTIGFVSLGCPKALTDSELILTRLSAEGYRTSKRYEGADLVIVNTCG
FIDDAVKESLDAIGEALAANGKVIVTGCLGARANEQGDNLVKSLHPAVLAVTGPHAADEV
LDAVHAHLPKPHDPFVDLVPPPSNAIEGVGVKLTPRHYAYLKISEGCNHRCTFCIIPSMR
GDLVSRPIGEVLTEARRLFEGGVKELLVISQDTSAYGVDVQYRTGFWDGRPIRTRMLELV
RELGQLARAHGAWVRLHYVYPYPHVDEVVPLMAEGWVLPYLDVPFQHSHPDVLRRMKRPA
SGEKNLERIRRWREICPELVVRSTFIAGFPGETEEEFAHLLDFVREAQIDRAGCFAYSPV
AGAAANALPGALPDAVREERRARFMAVAEQVAVERLQRRVGATMQVLVDQAVGLGKKGGV
GRTYADAPEIDGTVRLLPPEKVSKTYRTGEFIRARIVGAEGHDLIGVPV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaaccgtcaccgaacacgcccctgctgcggccccgaccatcggcttcgtgagt
ctgggctgccccaaggcgctgaccgactccgagctgatcctgacgcgcctgagcgccgag
ggctaccgcaccagcaagcgctacgaaggcgcggacctcgtcatcgtcaacacctgcggc
ttcatcgacgacgcggtcaaggaaagcctggacgcgatcggcgaggcgctcgccgccaac
ggcaaggtgatcgtgaccggctgtttgggtgcgcgcgccaacgagcagggggacaacctc
gtgaagtcgctgcaccccgcggtgctggcggtgaccggcccgcacgcggcggacgaggtg
ctcgacgcggtgcatgcgcacctgcccaagccgcacgatccgttcgtcgacctggtgccg
ccgccgagcaacgcgatcgaaggcgtcggcgtcaagctcaccccgcgccactacgcgtac
ctgaagatcagcgagggctgcaaccatcgctgcacgttttgcatcatcccgtcgatgcgc
ggcgatctggtgagccgcccgatcggcgaagtgctgaccgaggcgcgccgcctgttcgag
ggcggcgtcaaggagctgctcgtcatcagccaggacaccagcgcctacggcgtggacgtg
cagtaccgcaccggcttctgggacgggcggccgatccgcacgcgcatgctggagctggtg
cgcgagctggggcaactggcgcgcgcgcatggggcgtgggtgcggctgcactacgtctat
ccctacccgcacgtggacgaggtggtgccgctgatggcggaggggtgggtgttgccgtac
ctcgatgtgccgttccagcacagccacccggacgtgctgcgccgcatgaaacgcccggcc
agtggcgagaaaaacctcgagcgcatccgccgctggcgcgagatctgcccggaactggtc
gtgcgcagcaccttcatcgccggctttcctggcgagacggaagaggagtttgcgcacctg
ctcgacttcgtgcgcgaggcgcagatcgaccgcgccggctgctttgcgtactcgccggtg
gcgggggccgcggccaacgcgctgcccggcgcgctgccggacgcggtgcgtgaggagcgg
cgcgcgcggttcatggcggtggcggagcaggtggcggtggagcgcctgcagcgccgcgtt
ggcgcgacgatgcaagtgctcgtggatcaggcggtcggcctcggcaagaagggcggggtg
ggacgcacctacgcggatgcgccggaaatcgacggcacggtgcgcctgctgcccccggaa
aaggtcagcaagacctaccgcaccggggagttcatccgcgcgcgcatcgtcggcgcggaa
gggcacgatctgatcggcgtgccggtgtga
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