KEGG   Triticum urartu (red wild einkorn wheat): 125508143
Entry
125508143         CDS       T08232                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03020  RNA polymerase
tua03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125508143
  09124 Replication and repair
   03420 Nucleotide excision repair
    125508143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tua03021]
    125508143
   03400 DNA repair and recombination proteins [BR:tua03400]
    125508143
Transcription machinery [BR:tua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125508143
DNA repair and recombination proteins [BR:tua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125508143
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C CpXC zinc_ribbon_4
Other DBs
NCBI-GeneID: 125508143
NCBI-ProteinID: XP_048528703
LinkDB
Position
5:complement(121180715..121182163)
AA seq 114 aa
MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ
DVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtgccatgaagttttgccgtgaatgcaacaacatcttgtatcccaaggaggacagg
gaccagaaggtgctcctcttcgcctgcaggaactgcgaccaccaggaggtcgcagacaac
aactgtgtctaccggaacgtggtgcaccacagcgctggagagttcacccaggtgctccag
gacgtcgcaggtgacccaacccttccccgcaccaaggaagtccgctgcgccgtctgtggc
catggcgaagctgtcttcttccaggccaccgcgagaggggaggaggggatgacgctcttc
ttcgtctgctgcaacccgagctgcggccatcgatggagagaatga

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