KEGG   Triticum urartu (red wild einkorn wheat): 125513270
Entry
125513270         CDS       T08232                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
tua  Triticum urartu (red wild einkorn wheat)
Pathway
tua03020  RNA polymerase
tua03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125513270
  09124 Replication and repair
   03420 Nucleotide excision repair
    125513270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tua03021]
    125513270
   03400 DNA repair and recombination proteins [BR:tua03400]
    125513270
Transcription machinery [BR:tua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125513270
DNA repair and recombination proteins [BR:tua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125513270
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 125513270
NCBI-ProteinID: XP_048534299
LinkDB
Position
6:complement(20578119..20579113)
AA seq 139 aa
MSGMEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKWEQLQHMSDGGADQVSQVFEKSQ
AYVKRFSRYKNPDAVRQVRETLSRYSLVEFELCTLGNLCPDTADEAKALVPSLVPGGRFD
SDDRVDKMLNDLSLIKKFE
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtccggcatggaggaggaggagaacgccgccgagctcaagatcggcgaagagtttctt
aaggccaagtgcctgatgaactgcgaggtggcgataatcctggagcacaagtgggagcag
ctgcagcacatgtcggacggcggcgccgaccaggtctcgcaggtcttcgagaagtcgcag
gcctacgtcaagcgcttcagccgctacaagaaccccgacgccgtgcgccaggtccgcgag
acgctctcccgctacagcctcgtcgagttcgagctctgcaccctggggaacctctgcccc
gacaccgccgacgaggccaaggcgctcgtcccctccctcgtccctggcggcaggttcgac
agcgacgaccgcgtcgacaagatgctcaacgacctctccctcatcaagaagttcgagtag

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