Tupaia chinensis (Chinese tree shrew): 102492852
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Entry
102492852 CDS
T02978
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion molecule 1
KO
K06527
vascular cell adhesion molecule 1
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup04064
NF-kappa B signaling pathway
tup04514
Cell adhesion molecules
tup04668
TNF signaling pathway
tup04670
Leukocyte transendothelial migration
tup04933
AGE-RAGE signaling pathway in diabetic complications
tup05143
African trypanosomiasis
tup05144
Malaria
tup05417
Lipid and atherosclerosis
tup05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102492852 (VCAM1)
04668 TNF signaling pathway
102492852 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102492852 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102492852 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
102492852 (VCAM1)
05143 African trypanosomiasis
102492852 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102492852 (VCAM1)
05418 Fluid shear stress and atherosclerosis
102492852 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102492852 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tup04090
]
102492852 (VCAM1)
04091 Lectins [BR:
tup04091
]
102492852 (VCAM1)
CD molecules [BR:
tup04090
]
Proteins
102492852 (VCAM1)
Lectins [BR:
tup04091
]
I-type lectins (Siglecs)
102492852 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
C2-set
Ig_2
V-set
C2-set_2
Ig_5
ICAM_N
Ig_6
Ig_4
ICAM1_3_5_D2
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
102492852
NCBI-ProteinID:
XP_006169101
LinkDB
All DBs
Position
Un
AA seq
738 aa
AA seq
DB search
MPRKMVMIFGTSNILWIVFAASQAFKIETSPESRILAQVGDSVSLTCSTMDCESPRFSWR
TQIDSPLNGKVKTEGTKSTLIMNPVGFENEHSYLCTATCGSRKLEKGIQVEIYSFPKDPE
IHLSGPLEAGKPITVKCIVRDVYPFDRLEMDLLKGNNLMKNQDFAEDMDKKSLETKSLEV
TFTPVIEDIGKALVCRAQLHISETDSDPKEKMTTKQLQVYSSPKNTVITVNPSTSLQENS
SVTMTCSSEGLPAPKIIWSKKLEDGNMQPLSENATLTLIAMRMEDSGIYVCEGVNLIGKD
RDEVQLSVQEKPFTVEISPGPRIAAQIGDSVTVTCSVRGCESPTFSWRTQIDSPLSGKVK
SKGPKSTLTLSPVSFENEHYYLCTVTCGRKKLEKGIQVELYSFPRGPEIEMSGPLVNGNP
LTVNCKVPNVYPLDRLELELLKGDTLMKNKVFLEEVEMKSLETKSLEVTFIPTIEDTGKV
LVCRAKLHIDEMEFEPKQRQSIQTLNVNVAPRDTTILVSPSSILEEGSSVNMTCSSDGLP
TPKIQWSKLRNNGDLQPLAENTTLTLISTKMEDSGIYVCEGINQAGISRKEVELIIQVAP
KDIQLTAFPSESVREGDTVIISCTCGNAPETWIILKKKAKTGDTVLKSIDGAYTIRKAQL
EDAGIYECESKNEIGSQLRSLTLDVKGVENKDYFSPELLVLYCASSLIIPAIGMIVYFAR
KANMKGSYSLVEAQKSKV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagatggtcatgatctttggaacttcaaatatactttggatagtgtttgca
gcttctcaagcttttaaaattgagacctcccctgaatccagaattcttgctcaggttggt
gactctgtgtcactgacttgtagtaccatggactgtgagtccccacgtttctcttggaga
actcagatagacagtccactgaatgggaaggtgaagactgaggggaccaaatccacgctg
atcatgaatcctgttggtttcgagaacgaacattcttacctatgcacagcaacctgtgga
tcgagaaaactggaaaaaggaatccaggtggagatttactctttccctaaggatccagag
attcatctgagtggacctctggaagctgggaagccaattactgtcaaatgtatagttcgg
gatgtatacccatttgacaggctggagatggatttgctgaaaggcaacaatctcatgaag
aatcaggactttgcagaggatatggacaagaagtccctggaaaccaagagtttggaagta
acttttactcctgtcattgaggatattggaaaagctcttgtttgccgagctcaattacac
atcagtgaaactgattctgaccccaaggaaaagatgactacgaaacaattgcaagtctac
agctcacccaaaaatacagttatcactgtcaatccctctacaagcctgcaagaaaatagc
tctgtgacaatgacatgttctagcgagggcctaccagctccgaagattatatggagcaag
aaattagaagatggaaacatgcagcctctttctgagaacgcaactctcaccttaattgct
atgagaatggaagattctggaatttatgtgtgtgaaggagttaatctgatcgggaaagac
agagatgaggtgcaattaagtgttcaagagaaaccatttactgttgagatctcccctgga
cctcggattgctgctcagattggggactcagtcacagtgacgtgtagtgttagaggctgt
gagtcccccactttctcctggagaactcagatagacagccctctgagtggaaaggtgaag
agcaaagggcccaagtccacactgaccctgagccccgtgagctttgagaatgaacattat
tacctgtgtacagtgacctgcggacgtaagaaactggagaagggcattcaggtggagctc
tactcattccctagaggtccagagattgagatgagtggtccactagtgaatgggaaccct
ctcactgtaaactgcaaggttccgaatgtgtaccctttggaccgactggagcttgaatta
ctcaaaggagacactcttatgaagaataaagtctttttggaggaagtggaaatgaagtcc
ctagagaccaaaagtttggaagtgaccttcatccccaccattgaagacactggaaaagtt
cttgtttgtcgggctaagttacatattgatgaaatggaatttgaacccaaacaaaggcag
agcatacagacacttaatgtcaatgttgctcccagagataccaccatcttggtcagtccc
tcctccatcctggaagaaggcagctctgtgaatatgacttgctcaagtgatggccttcca
actccaaaaatccagtggagcaagctgcggaataatggagatctacagcctcttgctgag
aatacaactctcaccttaatttctacaaaaatggaagattctggtatttatgtgtgtgaa
gggattaaccaggctggcataagcagaaaagaagttgaattaattattcaagttgcgcca
aaagatatacaacttacagcttttccttctgagagtgtcagagaaggagacactgtcatt
atctcctgtacatgtggaaatgctccagaaacttggattatcctgaagaaaaaagcaaag
acaggagacaccgtgctaaagtctatagatggtgcatatactatccgaaaggcccagttg
gaagatgcaggaatatatgaatgtgaatctaagaatgagattggctcccaattaagaagt
ttaacacttgatgtcaaaggagttgaaaataaggactatttttcccctgaacttcttgtg
ctttactgtgcatcttccttaataatacctgccattggaatgatcgtttactttgcaaga
aaagccaacatgaagggttcatatagtctcgtagaagcacaaaaatccaaagtgtag
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