Tetranychus urticae (two-spotted spider mite): 107364943
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Entry
107364943 CDS
T04901
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
tut
Tetranychus urticae (two-spotted spider mite)
Pathway
tut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107364943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tut03400
]
107364943
DNA repair and recombination proteins [BR:
tut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107364943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
ENTH
Motif
Other DBs
NCBI-GeneID:
107364943
NCBI-ProteinID:
XP_015787884
UniProt:
T1KKA9
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MSQKSQPTLLRWFTKSPATNKTTTEPDTKNQTKENVNKNVTPVKCKESPKAKEGESNNRI
VPKRLLESPGPSTASEESSPELKTPSRKRPNTRNHTPAKRRRVRIEDDSEDEYKPDAIDE
SSDASADAVSEESPIVSESEYDEDDDDIVESKPKKAKKAAPSKGAVTPRTKNKSSLSDKT
VARLSAFSAAKTDESVGVLENDGAREWPHLKFDFLQPDKIMDKQRRRPDHPEYDPTTLYI
PESFIKKQTPAHAQWWEFKASHYDTVFFFKMGKFYELFHMDAVIAVSELNLLFMRGEYAH
AGFPEKSYRRFSDVLLQKGYKIARVEQTETPEQRDERCKNQKKKDAVVSRELCRITTVGT
RTSSFLDAEPSSPHSTYLLAISELSDAEKSLEEPKFGVCFIETSIGKFYLSQFTDDRYCS
KLRTLFTCFPPAELLLERNKASPKLLQIISNCLPSVNKVMLKPKEFWDPEKTLKTLNQEY
YNNDLPALLVNMTDPSDALRQKPLDEFKLCLRSLGAVIFYLKSCLIDEELLSLKLYEKYV
PPCGDKNNIGAKGNMVIDSVSLKNLEIFENSAGGTEGTLFNTMDYCGSKFGKRLLRSWLC
APLCDVNLINDRLDAIDDLKKSDLQSTVQELSDLISKLPDLERLLSKIHTQGCARRSREH
PDARAVLFDNAIYSKRKILDFLAALEGFKITLQIRQLLYNVRDQLKSKLLLKCASYPSEG
YFPDITGILTHFDEAFDHNLAKKEGKIIPRSKVDEDYDLAVRDEKDVQDLLEQVRRDVSS
KLGAKVTFANSGKTRYMLEVPDAISKKLSDDYEWKGSRKGFRRFHTAKITTLLTELAGAE
ERKENILKDIMRRIFESFSKYYNDWIAVVKCVALVDCLISLTKCSTNMVKWGATISRPII
EVDPEKKPFISIEQGRHPSLLKYKSNFVPNDISLGDQLLLLTGPNMGGKSTLMRQTGLIA
IMAQIGCYVPASKCHLSLLDAIFTRLGAYDRITEGQSTFYVELSETSLILKNASKHSLVL
LDELGRGTSTYDGTAIASAVINELIKHIQCRTLFSTHYHSLVEQFCKDDRVKLGHMACMV
ENENEEDPSDESITFLYQLTDGPCPKSYGFNAAKLAGIPIDIIRKAHETAKAFETFGKAN
RLMRSLINDEDKPINELRNIIKTLQSIQVKF
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaaatctcaaccaacacttcttcgttggttcactaaatcgccagctactaat
aaaactacaactgagcctgataccaaaaatcaaaccaaagaaaatgtcaataaaaatgtt
acaccggttaaatgtaaagaaagtcccaaagcaaaggaaggagaaagtaacaacagaatt
gttcctaaaaggcttctggaaagccctggtccgagtacagccagcgaagagtcaagtcct
gagcttaaaacaccgtctagaaaacgaccaaatactagaaatcatactccagccaagcga
agacgggttcgtatagaagatgatagcgaagatgaatataaacctgatgcaattgatgaa
tcgagtgatgcgtctgctgatgcagtttccgaagaatctcctatcgtttcggagtctgaa
tatgatgaggatgatgatgatattgttgaaagtaaaccaaagaaagccaaaaaggcagca
ccttcaaaaggagcagtaacacctcgaaccaaaaataaatctagtctaagtgataaaaca
gttgcccgtttatctgcattttcagcagctaaaacagatgaatctgtcggagtattggag
aatgatggtgcacgtgaatggcctcatttgaaattcgattttctccaacctgataaaata
atggataaacaacgtcgacgtcctgatcatcccgaatatgatccaaccactctttatatt
ccagaatctttcatcaaaaaacaaactccagctcatgcccaatggtgggaatttaaagct
tcccattacgatactgttttcttcttcaagatgggtaaattttatgagcttttccatatg
gatgccgtaattgcagtctcagaattgaacttgctctttatgagaggtgaatatgctcac
gctggttttcccgaaaagtcttatcgtcgattcagtgatgttttgcttcagaaaggttac
aaaattgctcgtgttgagcaaactgaaactcccgaacaacgtgatgaacgctgtaaaaac
cagaaaaagaaagatgccgttgtttctagagaactttgcagaataacaactgttggaact
cgaacatcttcctttttagatgctgaaccatcgtcaccacattccacttatctattagcc
atttcagagctttcagatgcagagaaatcactcgaggagccgaaatttggtgtttgcttc
atcgaaacatcaattggaaaattttacctgagtcaatttacagatgatcgatattgttct
aagctgcgtacgttatttacatgttttccaccggctgaattgctccttgagcgaaacaaa
gcatcaccaaagttgttacaaatcatatccaactgtttaccttcagtgaataaagttatg
ctcaaacctaaagaattttgggatcctgaaaagactttgaaaacccttaaccaagagtat
tacaataatgatttaccagctttgttggtgaatatgaccgatccttccgatgcattgcgc
caaaaacctctagatgaatttaaattgtgccttcgttcactcggtgctgttattttctac
ctcaaatcttgtcttattgacgaggaactattatcattaaaactttacgaaaaatatgtt
ccaccttgtggagataaaaataatattggtgccaaaggaaatatggttattgacagtgtt
tcacttaagaatctggagatatttgaaaatagcgctggtggaactgaaggtacgttattt
aataccatggactattgcggctctaaatttggaaaaagattgctccgttcttggttatgt
gctccactgtgtgatgtcaatttgatcaatgaccgactagatgctattgatgatctcaaa
aagtctgatttacagagtaccgtacaagagctatctgatctgatctcaaaattacctgac
ttagaaaggttactcagtaaaatacatactcagggctgtgcacggagaagccgtgaacat
ccagatgcgcgtgctgttctatttgataacgccatttattcaaaaagaaaaattcttgat
tttctagctgccttggaaggatttaagataactctacaaatccgtcaattactttacaat
gttcgagatcaattgaaatccaagttgttacttaaatgtgcctcttacccctcggaaggt
tattttcctgatattacaggaatcttaacacattttgatgaagcatttgaccataatttg
gccaagaaagaaggtaaaataattccccggtccaaagttgatgaagattatgatcttgct
gttcgtgatgaaaaagacgtacaagatcttttggaacaggttcgtcgtgatgtatcttcc
aagttgggagctaaagtcacttttgctaattctggtaagactcgatacatgttagaggtt
cctgatgccatttctaaaaaattgagcgatgattacgaatggaaaggatctcgaaaagga
tttcgtcggtttcacactgcaaagataaccactctgttaactgagctggctggagctgaa
gaaagaaaagaaaatattcttaaagatattatgagacgaatctttgaatctttttccaaa
tattataatgattggatcgctgtggtcaagtgtgttgctcttgtcgattgtttgattagt
ttaactaaatgctctacaaatatggttaagtggggagcaaccataagtcgaccaattatt
gaggttgatccagaaaagaagcctttcatttccattgaacaaggtcgtcatccttctctt
cttaaatataaaagtaactttgttcccaatgatattagtctaggagatcaacttcttctt
cttactggacccaatatgggaggtaaatcaactctcatgagacaaactggattgattgca
attatggctcaaattggttgttatgttcctgcatcaaaatgccatttaagtttacttgat
gccatctttactcgtcttggtgcttacgatcgtattaccgagggtcaatcaacattttac
gttgaactgagcgaaacctcgttgattttgaaaaatgcttccaaacattcacttgttcta
ttagatgagcttggcagaggaacctcaacttatgatggaaccgctattgcttcagctgta
attaatgagctaattaagcacattcaatgtcgcacacttttctccactcattatcattcc
ttggttgaacaattctgcaaagatgatcgagttaaacttggtcatatggcttgtatggtt
gaaaatgagaatgaagaagatccatcggatgaatccatcacttttctctatcaattgact
gatgggccttgtcctaaaagttatggtttcaatgctgctaagcttgccggaataccaatt
gatattattcgtaaagctcatgaaacagccaaagcttttgaaacatttggtaaagcaaac
agattaatgcgatcactaatcaacgatgaagacaaaccaatcaatgagctgcgtaacata
atcaaaactttacagtccattcaagtcaagttttaa
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