Trichomonas vaginalis: TVAG_2v0079290
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Entry
TVAG_2v0079290 CDS
T01022
Name
(RefSeq) DNA repair DEAD helicase RAD3/XP-D subfamily member family
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TVAG_2v0079290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tva03400
]
TVAG_2v0079290
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TVAG_2v0079290
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
TVAG_2v0079290
FA (Fanconi anemia) pathway
Downstream FA components
TVAG_2v0079290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
Tn7_TnsA-like_N
Arm-DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
4774715
NCBI-ProteinID:
XP_001328927
UniProt:
A2DSC5
LinkDB
All DBs
Position
IV:complement(12665384..12668397)
Genome browser
AA seq
884 aa
AA seq
DB search
MNGPKPAHQFKVAGIEVPFPHEKPYAAQMALMAGVIKSMRTGQNAILESPTGTGKSIALL
SAALAFQKSQKEVNITPPGQIDPPITKSYLGFFPPMKLVHTDQEIFSPLLTQGLNPSEIP
RYSEFEGTEGPTDYTTDFYVKRKQHAGQIWYATRTHQQLKQLVKEMKKLPFHPQMVIMAS
RAQVCVNPKIMNQSDVDGHCSDLQKNGGCPYDKKKGIPKEFKPNGILDKFEIEDLKDWCR
KNKGCPYFISRKMMMAADIVFCPYNYFLDPKIKGQMQLDLTGVYLIIDEAHNIENSCRDG
GSFHQSRKDLEWALMYLRKSIKKSDIPSLRKAFMIVLELITKEYEWFTSTTKYLRLQGQK
EFIVRDNKAFYDSLRLNLSFYTKLVAAFDCIFKFCNTMNFPQIYQEADKIPMILGGILEQ
QWVAIALTLKYDLRNYAFAIVLGDDESNDIFHGLCMNPGAVFHRPGTEASNVILSSGTLT
PLEEFENEFGVPFPIRLSAPHVISPDQVVGFTITSCDNVTLSSRHQYLESQGMRNDVNLK
LAEILLHILPVIPNGVLFFVTSHSFLMRMLDAWQKAGLYEKIDKIKKIFYETPDSDPEFF
DKYKASCEEGSLLIGVFRGRSSEGIDFVDEQARAVIVFGIPFPSYYDIDVKLKKEYNDYK
NQTGNVWYDTQAYRSLFQALGRCIRHKNDFGSVILIDQRYPNELHRFPKWLKTQIRNDVG
LNQIVTELSRFYQRMKEKFPRKISLKMNEKLTFYCCDCHSLVVDCKKVKDGQSFQITKNG
FLSLSDAEQKEHYLIIQKNDIEEMKLNFFSPVFKEEDKLVYEKCFCDCGNCLGVRVYAAS
SVERSSIGSLFLLLSRLNVKVGNNFVGIQPTEKKVSKNVFNAYF
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaccgaaacctgcacatcaattcaaagttgcaggcattgaggtcccatttcca
catgagaaaccatatgcagcacaaatggctcttatggccggtgtcattaagtcaatgaga
acagggcaaaatgcaattttggaatctcctacaggtacaggtaagtcaattgcgctttta
tcagcagctttagcatttcaaaagtctcaaaaagaagtaaacatcacacctccgggccaa
atcgaccctccaattacaaaatcatatcttggattcttcccaccaatgaaacttgttcat
acagatcaagaaatcttctcaccattacttacacaaggtttaaatccaagtgaaatacct
agatattcagaattcgaaggaacagaaggaccaacagattatactacagatttttacgtc
aagcgtaagcaacatgcaggtcaaatatggtatgcaacacgtacacatcaacaactaaaa
cagctcgtcaaagaaatgaaaaaattaccttttcatcctcaaatggtcattatggcctca
agagcgcaagtatgtgttaacccaaagatcatgaatcaatcagatgtagatggtcattgt
agcgacttacaaaaaaacggcggatgtccttatgacaagaaaaaaggcattccaaaggaa
ttcaagccaaacgggatattagacaagttcgagattgaagatctgaaagactggtgtcga
aagaacaaaggctgcccatactttatttcaagaaaaatgatgatggcagctgatatcgtc
ttttgcccctacaattattttttagaccccaaaataaaaggtcaaatgcaactcgacctc
acaggtgtttatttaatcatcgatgaagctcacaacatagagaacagctgtagggatggc
ggatctttccatcaatcaaggaaagatttggaatgggcactgatgtatctaagaaaatct
attaaaaaaagtgacatcccatcattacgaaaagcatttatgatagtattagaattaatc
actaaagagtatgagtggttcacatctactactaaataccttcgattgcagggtcaaaaa
gaatttatagtcagagataataaagctttttatgacagtctcagattaaatctctctttt
tataccaaactagttgcagctttcgattgcatatttaaattctgcaatacaatgaatttt
ccacaaatttaccaagaagccgataaaattccaatgattttaggtggaatattggagcaa
caatgggttgcaattgctctcacactaaaatatgatctaagaaactacgcatttgcaatt
gttcttggagatgacgaaagcaacgatattttccatggattatgcatgaatccaggtgca
gtattccatagaccaggcacagaagcaagcaatgtcattctttcctcaggaactttgaca
ccattagaagaatttgaaaatgaattcggagttccattccctatcagactgtcagcccct
cacgtgatatcccctgatcaagttgtcggttttacgatcactagttgtgacaatgttact
ttatcatcaagacatcaatatcttgaaagccaaggaatgagaaacgacgttaatctcaaa
cttgcagagatattacttcatattttacctgttattcctaatggcgttttattcttcgtc
acatctcattcgtttttaatgagaatgctggatgcatggcaaaaagcaggtctttatgaa
aaaattgacaaaatcaagaaaattttttacgaaactcctgattccgatcccgaattcttt
gacaaatacaaggcatcgtgcgaagaaggaagcttgttgataggtgttttcagaggaaga
agcagcgaaggtatcgatttcgttgatgaacaagcgagagcagttattgttttcggaatt
ccttttccaagttattatgacatcgatgtcaaattgaagaaggaatacaacgactacaag
aaccaaacaggaaatgtttggtatgatacacaagcgtataggagtcttttccaggcttta
ggtcgttgtataagacacaaaaatgattttggttctgtaattttgattgaccaacgatat
cctaatgaattacatcgttttccaaagtggttgaaaactcaaattagaaatgatgtcggg
ttaaatcaaattgtaacagaattgtcacgcttttatcaaagaatgaaagaaaaattccca
agaaaaatcagtctgaaaatgaatgaaaaattgacattttattgttgtgattgtcattct
cttgttgtagattgtaagaaggttaaagatgggcagagtttccagataacaaagaatgga
ttcttatctttgtctgatgctgaacaaaaagaacattatttgataatccagaaaaatgat
attgaagaaatgaaattgaatttcttttctcccgttttcaaagaagaagataaacttgta
tacgaaaaatgtttttgcgattgcggaaactgtttaggagttagagtgtatgcggcttct
tctgttgaaagaagttcaattggaagtttattccttcttctaagcagattgaacgtaaaa
gttggaaataacttcgtcggaatacaaccaactgagaaaaaagtttctaagaatgttttt
aatgcgtacttttag
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