KEGG   Trichomonas vaginalis: TVAG_2v1022270
Entry
TVAG_2v1022270    CDS       T01022                                 
Name
(RefSeq) DNA-directed 5'-3' RNA polymerase protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tva  Trichomonas vaginalis
Pathway
tva03020  RNA polymerase
tva03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TVAG_2v1022270
  09124 Replication and repair
   03420 Nucleotide excision repair
    TVAG_2v1022270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tva03021]
    TVAG_2v1022270
   03400 DNA repair and recombination proteins [BR:tva03400]
    TVAG_2v1022270
Transcription machinery [BR:tva03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TVAG_2v1022270
  RNA polymerase III system
   RNA polymerase III
     TVAG_2v1022270
  RNA polymerase I system
   RNA polymerase I
     TVAG_2v1022270
DNA repair and recombination proteins [BR:tva03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TVAG_2v1022270
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 4747437
NCBI-ProteinID: XP_001302693
UniProt: A2FZ94
LinkDB
Position
I:20863513..20863845
AA seq 85 aa
MSEQEAELRPRITTPYLTKYERARVLGTRGMQISLGAPVTIDAGDLTDPIAIAEKELEAG
QLPLIIRRYLPNHEYEDVAVKYLII
NT seq 258 nt   +upstreamnt  +downstreamnt
atgagcgagcaggaagcagaactccgacctcgtattacaacaccatatcttaccaagtac
gagcgtgctcgtgtccttggtacacgcggtatgcaaatctccttaggcgctccagttaca
attgatgctggagatttaacagacccaatagcaattgcagagaaagaactcgaagctgga
caacttccacttatcattcgcagatatctccctaatcacgaatacgaagatgttgctgtt
aaatatttgatcatttaa

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