Tachysurus vachellii: 132839206
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Entry
132839206 CDS
T09596
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03008
Ribosome biogenesis in eukaryotes
tvc03013
Nucleocytoplasmic transport
tvc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132839206 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
132839206 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132839206 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132839206 (xpo1a)
03009 Ribosome biogenesis [BR:
tvc03009
]
132839206 (xpo1a)
03016 Transfer RNA biogenesis [BR:
tvc03016
]
132839206 (xpo1a)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132839206 (xpo1a)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132839206 (xpo1a)
Ribosome biogenesis [BR:
tvc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
132839206 (xpo1a)
Pre-60S particles
132839206 (xpo1a)
Transfer RNA biogenesis [BR:
tvc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
132839206 (xpo1a)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132839206 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
BID
Motif
Other DBs
NCBI-GeneID:
132839206
NCBI-ProteinID:
XP_060716031
LinkDB
All DBs
Position
24:complement(14285133..14351904)
Genome browser
AA seq
1071 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASVV
EKEGVYLAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVSLFTLTMVQLKQMLPL
NTNIRMAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRLLM
VCRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLAAHITSEIPKIFDAVFECTLNMINKDFEE
FPEHRTNFFYLLQAVNSNCFPAFLSIPPVQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLIEEGKISI
TLNTGSPVSNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagatatgacaatgttagcggaccatacagcccggcagctgctggacttctct
caaaaactggacatcaacctgctcgacaacgtggtcaattccatgtactacgatgtcggc
tctcagcaacggctggcacaggaagtcctgactaacttgaaggatcacccagacgcgtgg
accagagtggacaccatcttggagttttctcagaacatgaagaccaaatactacgccctt
cagattttggaaaccgttattaaaacacgctggaaaattctaccgagaaaccagtgtgaa
ggaattaagaaatacgtcgtggggctgattatcaagacgtcctcagacgcttctgtggtc
gagaaagagggagtttacctggcaaagctgaatatgatcttagtgcagatcctgaagcag
gagtggccaaagcactggcccacgttcatcagcgacatcgtgggagcgagtcgtacgagc
gagagcctctgccagaacaacatgatcatcctgaaactgctcagcgaggaggtgtttgac
ttctccagcggacagatgactcaggtcaaagccaagcacctgaaagacagtatgtgcaac
gagttctcccaaatttttcagctttgccagtttgtcatggaaaattcacagaacgctcca
ttggtccacgccaccctggagaccctcctgcgcttcctgaactggattccactgggctac
atttttgagaccaaactcatcagcaccctggtttataagtttctgaacgttccgatgttc
cgaaacgtaaccctgaagtgtctgacggaaatcgccggcgtcagcgtcaatcagtacgag
gaacagttcgtcagcctcttcacgctaaccatggtgcagctcaaacagatgctgcctctg
aacacaaacatccgtatggcgtactcgaacgggaaagacgacgaacagaacttcatccag
aacctcagcttgttcctgtgcaccttcctcaaagagcacgggcagctgatcgagaagagg
cccaacctgcgggaaacacttatggaggctctccactacatgctgcttgtgtcagaggtg
gaggagaccgagatctttaagatctgtctggagtactggaaccatttggccgccgagctg
tacagagagagtccgttcagcacctccacgtccccgctgctctctgggagccagcacttt
gacgtgcccccacgccgacacctctacctgcctgtactctccaaagtgcgtctcctgatg
gtctgccgcatggctaaaccggaggaggtactcgtggtggagaacgatcagggcgaggtg
gtgagagagttcatgaaggacacagactcaatcaacctctacaagaacatgagagagact
cttgtgtacctgacccatttggattatgcggatacggagagaatcatgacggagaagctc
cataaccaggtgaacgggaccgagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggatccatcagcggagccatgcacgaggaggacgagaaacggttcctcgtcacagtc
attaaggacctgctggggctgtgcgagcagaagagggggaaagacaacaaggccattatc
gcctctaacatcatgtacatcgtagggcagtacccacgcttcctccgtgctcactggaag
ttcctcaagaccgtcgtcaacaagctctttgagttcatgcatgagacgcacgacggtgtg
caagacatggcgtgtgacacgtttatcaagatcgctcagaaatgtaggaggcattttgtt
caggtgcaggtcggggaggtcatgcccttcatcgacgagatccttaataacatcaacacc
atcatctgtgacctgcagccgcagcaggtgcatacgttctacgaggctgtagggtacatg
attggtgctcagacagaccaggcagtgcaggaacacctgatagagaagtacatgctgctt
ccaaaccaggtgtgggatagcatcatccagcaggccaccaagaatgtcgacatactcaag
gacccggagacggtgcgtcaactcggcagcatcctgaagaccaacgtgagggcgtgtaag
gctgtgggtcacccgtttgtggtgcagctgggacgcatttatctagacatgctcaacgtc
tacaagtgtctgagcgagaacatctcttctgccatccagaccaacggtgagatggtgaca
aagcagcctctaatcaggagcatgcggacggtgaagagagaaactctgaagctcatctct
ggctgggtcagccgttctaacgatccccaaatggtcggggagaactttgttccccctctg
ctcgaggctgtgctgatcgactatcagaggaacgtccccgccgctcgagaacccgaagtg
ctcagcaccatggcgaccatcgttaacaagctcgcagcccacattacttcagaaatcccc
aagattttcgatgctgtatttgagtgcaccttaaacatgatcaacaaggactttgaagag
ttccctgagcacaggacaaacttcttctacctgctgcaggcagtgaactcgaactgcttc
cctgcttttctgtccatcccaccggtgcagttcaaactagtgctggactccatcatctgg
gcctttaagcacaccatgaggaacgtagccgacaccggtttgcagattctgtacacgctg
ctacagaacgtggcccaggaggaagctgcggctcaaagcttctatcagacgtacttctgc
gacatcctgcagcacatcttctctgtcgtcacggatacgtcacacacggccggtttgacg
atgcacgcctccatcctggcctacatgtttaatctaatcgaggaggggaaaatcagcata
accctgaacacgggcagccccgtcagcaaccaggtctacgtacaggaatatgtggccaac
ctgctgaaaaccgccttcccacacctacaagatgcgcaggtgaaagtgtttgtaaccggt
ctgttcagcttgaatcaggatattcctgccttcaaagagcaccttcgggactttttggtg
cagataaaggagtttgccggcgaggacacgagcgatctgttcctggaggagcgagagacg
tcactgcgtcaagctcaggaggagaaacacaaactccagatgtctgtgccggggatcctc
aatccccacgaactccctgaggaaatgtgcgactga
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