Tachysurus vachellii: 132843524
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Entry
132843524 CDS
T09596
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132843524 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132843524 (tprb)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132843524 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
132843524
NCBI-ProteinID:
XP_060722890
LinkDB
All DBs
Position
3:34091369..34117019
Genome browser
AA seq
2356 aa
AA seq
DB search
MAAVLQQILERTELSKLTKAVQGKLERYLTEQQSENDYFKAQYEQLRVDSEEQYANLEKR
YTESQAQCLSLTNDHQKLQEEFTSLDEELKSLREKTKEQESSYTKLESEQKELSKLKDEL
EAEKRDLVRTLERTSQGVEGQSEDLKRLSDRLVDVSATNMQLRMKLDEMEALEVSIKYKE
KRLEQEKELLQGQVTWLSEELKTKSEELLCLSREKGSEILELKCSINNKEDECTRVQDQL
ASLKSSNENLQKQTEDLINKLKEAKEQQAISEEKFHNELNANIKLSNLYKGAAADAEAKS
EELSRAVEELHKLLKEAGDAHKAMEMKLAEAESCKQKEVAELKERIGLLEKELDNANDLL
SDTTRRVGFISAPAFPDDQLSTMSPTAAAVTKIKPGMKLTEIYAAYVESREQLQLEKLEN
KRVNKYLDDIVQEVETKAPVLKRQREELERAQKSVASLSAKLEHAVQEVQRLQKETDEAK
KHSSVLERDNQRFEVQLRDMARQVRVLLVELEEARGNHVVRDEDDVCSADVSSTSEVISQ
HLVSFRSVEELQQQNQRLLVALRDLGEEQERGEMDAESSKQSELQNSLEKAQIELEQLRD
QRANQMQLVESIVRQRDMYRVLLAQATGVSFPQQGTSPEEFSLTSTPRRSPAATPTAATP
TGLVATAIESTETVEAKAALKQLQEVFGAYKKEKAEREKALNEQCEKLQEQVSGLRSQNT
KVSTQLEFASKRYEMLQDNVEGYRKEIAALREKNQKQATMGQKNEQTVHTLTQDLRAANE
KLSMIESKAESLRKERDMLKMVESSLSQEKESILAQQRNQNLMLTNFKSMQATLERSESE
TRQRLSVQVEKQEREISQLQKKLEHEVEQRHTLARNHDKQLLDTKKQLEVQCALHQRTRE
QLNATQQELSSLQQQLNTSERRVSSPSTDTGLTGLQNGEDVEELRKRLNEAKNKTEELTE
RLESTATSLEQYRAMCLSLEEALEKEKQVTEQVKTSVESQLLEAREQLQQLEKKLLEAEK
GKNEMQEEKQKAVAAIEQQVSELQSNLSRLQAEHQEVLQKAAMAAAQEQQAVLDSQEQAR
LATEAQDKYEQEMLLHAADVEALQAAKAQTQHASQLRQQLEEKIQTTSAQLFEARVSWEE
QEKILKEEQTKMESRCQDLQKQNELLHEQIQAMSGTMATQLRQAAGDSSLNVSLTEEGKS
QEQLLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELKEVQDSLNAERERMQVT
SKTLSQHDELMKKTETMNVLMETNKMLRDEKERLEQELQQTQVKVSKLQSEIMPMQESNA
ELSEKSGMLQAEKKLLEEEIKRWKARTQILVSQQKDTDPEEYKRLHSEKEAHLKRIQQLT
EESNRLKAEAARSSGSVTTLQSQVHNLRENLGKVTVERDGLKKELEAKTLDIQEKLRTIT
QVKKLGRRYKTQYEELKVEHDKMVAAAASAPVQDQEAQQASAQELQSLRDSLSQSEAKTR
ELEGQLETLNKTIGERETETHNAQDQVSHLQGELTHLRLELVEKSAQEDRLRQQLAEKED
RTRKAIVGAKQKINHLVDVKGQLVKENEELKQQREELEVRINALRSQYEGRLSRQEKELR
ELRDLREQQERHVEQRDEPLEQGPSKTQEQQRTTEQRQISLKSTPVAERGSASTSEPPTA
NIKPTPLVATPSKPPAIPGNKPTPRASIKPMITPAAVPTPTPTATVMPTTQQESQEAMSS
EAPLDHVPVYGSTTGSVRSTSPNIQTTLTQPMLSVQQSQTTAFVQPTQQQSLPPTEPTSQ
EPASATMMMEATPSTSQIERPSTSTAVFGTVSATPGSTLTKRPREEELDNITVELEPQEE
PTEPPISKKLRMQRVELEMEMLTEDSTEAESVVPGGSQEAAEAVDELENYPTLEEVDEES
GASQSVPVEFLLSQVSDSHSQEEPNEPVIVIVSDSESEEEQEEDTDEEEQEFEEEDDDDE
EEDDDEGGIEVEGEDSNEGSGNGDPSEAYDCDNTEGPDATDPGTENEESLGATDSTQCIA
VSAPISSSMVTFSPEPISSSAPRPPPSPRRLQQTLPPRLSILAPPIQELAPPSQVQRIPA
RRQPVGRGLQLTSGVSGSTQPQQHFYEEDDRMVPSTPTLPVSHRTDCFSEALHSPQVAGV
LRFGFGLSDDVPQTSSSNADLDQLASQGGLGMYDSPMFLPAYEDSAGGRSVPTTPLQVAA
PVTAFSDTHSSEVTEHASQSVPTVSTSTPSVCVVTGPSIAEEQDVLLEAGEDGSGTEVVL
ESASQTDAEEPVQPSDDASLPSTSQEPSSSSADTSSTQPPKVRTGSGRQWTRGRATRGFV
KRDGSVVMGVRRRFAR
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgctgcaacaaatcttagagcgaaccgagttgtctaaactcaccaaggca
gtgcagggaaaactggagcggtatctaacggagcagcagagtgagaatgattactttaaa
gcgcagtatgaacagcttcgtgtggacagcgaggaacagtacgctaacctggagaagcgg
tacacagagagccaggctcagtgtctgtctttaacgaatgaccatcaaaaactccaggaa
gagttcacgtcacttgatgaagagctaaaatctctccgtgagaagacaaaggaacaggaa
tcctcgtatacaaagctggagtcagagcagaaggagctctcgaagttaaaggatgagctg
gaggctgagaagcgagacctggtgcgcactctagaaaggacgtcgcagggggtcgagggc
cagagtgaggatttgaaacggcttagtgaccggctggtggatgtcagcgctaccaatatg
cagttacggatgaagctagatgagatggaggctttggaagtttcaatcaagtacaaagag
aaacggctggagcaggagaaggagttgctccaggggcaggtgacctggctgagtgaggaa
ctgaagactaaaagcgaggagcttctctgtctgtcgcgggagaaaggcagcgagattcta
gagctcaagtgcagcataaacaacaaagaagatgagtgtaccagagtacaggaccagctg
gccagtctgaaatcctccaatgagaaccttcagaagcaaacagaggacttgattaacaaa
ctgaaagaggccaaagaacagcaagctatttcagaagagaagttccacaatgagcttaat
gctaacatcaagctgtctaacctgtacaagggagcagcagcggatgcagaggcgaagagt
gaagagctgagtcgagctgtagaggagctgcacaagctactgaaggaagccggagatgct
cacaaagctatggagatgaagctggctgaggcagagagctgcaaacagaaggaagtggct
gaactgaaggagcggattggcctcctggagaaagaattggacaacgccaatgatctcctg
tcagataccacacgcagagttggctttatatctgcaccagctttcccagatgaccagctt
agcacaatgtctcccactgcagcagctgttaccaagataaaaccaggcatgaagctcaca
gagatctacgcagcgtatgtagagtcccgagagcagctgcaactggagaaactggagaac
aaacgtgtgaacaagtacctggatgacattgtgcaggaggtcgagaccaaagcgcccgta
ctgaagaggcagagggaggagctggagcgagctcagaaatctgtggcaagtctgtctgcc
aagctggagcatgctgtgcaggaggtacagcgcttgcagaaggagacggacgaggccaag
aaacactcctctgtgctggaaagagacaatcagaggtttgaggtgcagctgcgtgacatg
gctcgccaggttcgggtgttgctggtggagctggaggaggcacgagggaatcacgtggtc
cgtgacgaggatgacgtgtgctcggctgacgtgagcagtacgtctgaggtaatatcacaa
cacctagtctcgttccgcagcgtggaggaactgcagcaacagaatcagcggcttctggtg
gccctgcgcgacctcggggaagaacaggagagaggagagatggacgctgaaagctctaaa
cagtctgagctacagaatagtttggagaaggcccagattgagttggagcagcttcgtgat
cagcgtgcaaaccagatgcagctggttgagtctattgtgcgccagcgagacatgtaccgt
gtcctgctcgcccaggctacaggggtcagcttccctcagcaaggcacttccccagaggaa
ttctctctcacctccacacctcgtcgctcccctgcagccacacccactgcagctacacca
actggccttgttgcaacagcaatcgagtccacggagacggtggaggccaaagctgccctg
aaacagctccaagaggtgtttggagcctataagaaagagaaggctgaacgtgagaaagct
ctgaatgagcagtgtgagaagctgcaagagcaagtgtcaggactgagatcccagaacacc
aaggtttccactcagctggagtttgcctctaaacgatatgagatgctgcaggataatgtg
gaaggataccgtaaggagattgctgctctaagggagaaaaaccagaagcaggccaccatg
gggcagaagaacgagcagactgtccacacactcacacaagacttgcgtgctgctaatgag
aaactgtccatgattgaatcgaaagcagaaagcctgcgcaaggagagagacatgctgaag
atggtggagtccagtctgagccaggagaaagagtcgatcctcgctcagcaaaggaaccag
aacctcatgctcaccaattttaaatctatgcaggccacactggagcgctcggagtcagaa
actcggcagcgactctcagtgcaggtggagaagcaggagagagaaatttcccaactgcag
aagaaactggaacatgaggtggagcagagacatactctggctcgtaatcatgataagcag
cttttggatactaagaagcaactggaggtgcagtgtgcattgcaccaaaggaccagagag
cagctgaatgccacacagcaggagctcagcagtctccagcagcagctgaacactagcgag
agaagggtttcgtcacccagcactgacacaggcctcacagggctgcagaacggtgaagat
gtagaggaactgcgtaagcgtctgaatgaggctaagaacaaaaccgaggagctgacggag
agactggaaagcaccgctacctctctggaacagtacagagccatgtgtctgagcctagag
gaagccctggagaaggagaaacaggttaccgaacaagtgaagacttcagttgaaagccag
cttttggaggctcgtgagcagctccagcaactggaaaagaagcttctagaagctgagaag
gggaaaaatgaaatgcaggaagagaaacagaaagccgtggcagccattgagcaacaggtg
agcgagctgcagagtaacctgagccgcctgcaggctgagcatcaggaagtgttacagaag
gcagctatggcggccgctcaagagcaacaggccgtgctggacagccaagagcaggcacga
ctggccacagaggcccaggataagtacgagcaggagatgctgttgcatgcagccgacgtg
gaggccctgcaggctgcaaaagcccagacgcaacacgcctcacagctccgtcagcagctt
gaagaaaagatccaaactaccagcgcacagctgtttgaggcccgagtatcctgggaggag
caggagaagatcctcaaggaggaacagactaagatggagtcacgctgtcaggacttgcag
aagcagaacgagctcctacatgagcagattcaagctatgagtggaacgatggcaacccaa
ctgcgacaggcagccggcgatagctcactgaacgtttctctcactgaggaggggaagtct
caggagcagctccttgagatcctcaggtttgttcgtcgggagaaagagatagccgagtct
cgtttcgaggtggctcagggagagagcctgaggcacagactgcgagtggagcacctggag
cgagagctgaaagaggtccaggactccctcaatgctgagagagagaggatgcaggtgacg
tcgaaaaccctgtcccaacacgatgaactgatgaagaagactgagaccatgaatgtactg
atggagactaataagatgctgagagatgagaaagaaagactggagcaggagctgcagcag
actcaagtgaaggtgagcaagctgcagtcagaaatcatgcccatgcaggagtccaatgcc
gagctgagcgagaagagcggcatgctacaagctgagaaaaaacttctggaagaggaaatt
aagcgctggaaagcacgaactcagatcctggtgagtcagcagaaggacacagacccagaa
gagtataaacggctgcactcggagaaagaagcccatcttaaacgcatccagcaactcact
gaggaaagcaatcggcttaaagcagaggcagccaggagcagtggttcagtcaccacgctg
cagtctcaggtgcacaacctgcgagagaatcttggcaaggttacggtggaaagggacggt
ctgaaaaaagagctagaggccaagactctggacatccaggagaagcttaggaccatcaca
caggtcaagaagctcggccgccgctataaaacccaatatgaggagcttaaagttgaacat
gacaagatggtggcagctgctgcctctgccccagtccaagaccaggaagctcagcaggct
tcggctcaggagctacagagcctccgtgattccctcagccaatcagaggccaagactcgg
gagctggagggtcagctagaaaccttaaacaaaactattggggagcgtgaaacagaaaca
cataatgcacaggaccaggtatcccatctgcagggggagctaacacacctgcgcctagag
ctagtggaaaagtcagcccaggaagacaggcttcggcagcagctggctgaaaaggaggat
cggaccaggaaggcaattgttggggcaaaacagaaaattaaccaccttgttgatgtgaaa
ggtcagttggtgaaggagaatgaggagctgaagcagcagcgcgaggagctggaggtacgc
ataaatgcactacggtcacagtatgagggccgcctgagccgacaggagaaggagctgcga
gagctacgggacctgcgtgagcagcaggagagacatgtagagcagagagatgagccactg
gagcaaggccccagcaagactcaggagcagcagaggacgacagaacagaggcagatttct
ctgaaatctacaccagtggctgaaaggggcagtgcaagcacctctgagccgcctacagct
aatataaaacctactcccctggtggcaacccccagcaagcccccagccattccaggaaac
aagcccactccgagggccagtataaaaccaatgatcacccctgctgcagtgcccacaccc
actcctactgcaacagtgatgcccaccacccagcaggagagccaggaagcgatgtcatca
gaggctcctctggaccacgtgcctgtctatggaagcaccactggttctgtgcgctccacc
agccccaatatccagaccacgctgactcagcccatgctaagtgtccagcagagccagacc
actgcattcgtccagcccacacagcagcagagcttaccccccaccgagcctacgagtcag
gagcctgcgtctgctaccatgatgatggaggctacacccagcacttcccagatagagaga
ccatccacatccacagctgtgtttggaacagtttctgccacacctggaagcaccttaact
aagcggcctcgagaggaggagctggataacataacagtggagctggagcctcaggaggag
cccactgaacctcccatctccaagaagctccgtatgcagagagtagagctggagatggag
atgctcactgaggacagcactgaagctgagagtgtcgtaccaggaggcagccaggaagca
gctgaggctgttgatgagctggaaaactatcccactctggaagaagtcgatgaggagtct
ggggcatctcagtctgtacctgtggaatttcttctctcccaggtgtctgattcacacagt
caggaagagccaaatgaaccagtgatcgtcattgtcagtgactcggaaagtgaggaagag
caggaggaggatacggacgaagaggagcaggaatttgaggaagaggatgatgatgatgag
gaggaggatgatgatgagggaggaattgaggtggaaggagaggacagcaatgaggggagc
ggcaacggagatcccagtgaggcctatgattgtgacaatactgagggtcctgatgctact
gacccaggtactgaaaatgaagaaagtctcggtgcaacagactccacccagtgcatagct
gtctccgcccccatatcaagctcgatggtgacgttctcccctgaaccaatctccagctct
gcacctcgtcctccaccgtccccacggagactgcagcaaactctgcctcctcgacttagc
attctggctccgcctatacaggagctagctccaccctctcaagttcagcgcatccctgcg
agacggcagcctgtaggacgaggacttcagctgacttcaggagtgtccggtagtacacag
cctcagcagcacttctatgaggaggatgaccgcatggtccccagcaccccaacactgcct
gtttcccatcgcacagactgcttcagtgaagctctccattctccacaggtagcaggtgtg
ctgcgtttcggttttggcctctctgatgatgtcccgcagaccagctcttccaatgcagat
ctggatcaactggcttcgcaaggagggcttggtatgtacgacagtcccatgtttctgccc
gcttatgaagactcggcagggggacgtagtgtacctactacccctctacaggtggctgct
ccagtcactgcgttctcagacacacactcctcagaggtgactgaacacgcctcccagtct
gtgccaacagtaagcacatctacaccgagcgtgtgtgttgtgaccgggcccagcatagct
gaagagcaagatgtcctgctagaagcaggagaagatggaagcggtacagaggtagtactg
gagtcggcatctcagactgatgctgaagagccagttcaaccttctgatgatgccagtctc
ccctctaccagccaggagccttcatccagctccgcagacacgagcagcactcagccaccc
aaagtcagaacaggatcaggcaggcagtggacccgaggacgtgccaccagaggtttcgtt
aagagagatggatcagtagttatgggagtgcgaaggcgctttgccagatga
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integrated database retrieval system
