Tachysurus vachellii: 132855256
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Entry
132855256 CDS
T09596
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04020
Calcium signaling pathway
tvc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
132855256 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132855256 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132855256 (grin1b)
Ion channels [BR:
tvc04040
]
Ligand-gated channels
Glutamate (ionotropic)
132855256 (grin1b)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
NYN
DUF3663
Motif
Other DBs
NCBI-GeneID:
132855256
NCBI-ProteinID:
XP_060740075
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Position
12:complement(22725999..22758997)
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AA seq
900 aa
AA seq
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MRLVLFAFLVSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSYDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVMMNTQRKIIWPGGDTEKPRGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEHTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDGKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPSVSTVV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctcttcgccttcctcgtgtcctgctcgtgtgcacggggaggctgcgag
cccaagatcgtcaacatcggcgccgtgttgagccagaagcggtacgaacaggtgttcaag
gacgcggtgacccaggccaacaatatctacggcaaagacaagttcaagatgaacgcgatc
tccgtcacgcacaagcccaacgccattcagatggcactgtctgtgtgtgaggatctcatc
tcaaaccaggtctatgccattttggtgagtcatcctcctcagtccaatgaccatctaacc
ccgacaccagtgtcctacacagctggattctatcgcatacctgtagtgggactgaccacc
cgcatgtccatctactcagacaagagcatccacctgtcgttcttgcgcacggtgcctcct
tactctcaccaggctcaggtgtggtttgacatgatgcgcgaattccgctggaatcacatt
atcctgatcgtgagcgatgaccacgagggtcgtgcggcacagaagaggctggagactctc
ctggaggagagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtgctcttgttcagccaagacacaaat
ctgactgcactgctccaggaggccaaagagctggaggcaagagttatcatcctgtctgcc
agtgaggacgaagcagcggccatttacaaagctgctcgccagctgaatatgaccgggtcc
ggttacgtgtggctggtgggagaaagggagatgtctggtaaagcgctaagtgaagctcca
gatggcttgctcggcctccagctgatcaacggcaagaacgagtcggcgcacatctacgac
gccgtggctgtggtggcccagtccatccaggagctctttgagaaggagaacatcaccgaa
cctccgaaaggatgcgtgggcaacacaaacatctggaagaccggcccactcttcaaacga
gtactgatgtcatccaagtatccagatggcctcacaggccgggtggagtttaacgatgat
ggagacaggaggttcgcccactacagcatcctcaactaccagaaaacccggttggtccaa
gtgggtgtctacaacggctcacaagtcatgatgaacacgcagaggaagatcatttggcca
ggaggagacactgagaagccaagaggttatcagatgtcaacaagattgaagatcgtgacc
attcatcaggagccgtttgtgtacgtgaagccgacgctgcgagacggaacgtgtaaagaa
gaacacaccgtgaatggagtgctgatcaaaaaagtgatctgcactgggcccaacgagacg
attcctggtcgtcccatagtgcctcagtgctgttatggattttgcatcgacctcttgatc
aagctcgcaatgacaatgaacttcacctacgaagtacacctagtggctgatggaaaattt
ggcactcaggagcgcgtgaataacagcaataagaaggaatggaacggcatgatgggagag
ctgctgggtggcctggcagacatgatcgtggctccacttaccatcaataatgagcgagcc
cagtacatcgagttctccaaaccatttaagtaccaggggctcaccattcttgtcaaaaag
gaaatacctcgcagtacgctggactcgttcatgcagccctttcagagcactctatggtta
ctggtgggtctttcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccatttggaaggtttaaagtgaatagtgaagaggaagaagaagacgccctcaccttatcc
tctgccatgtggttctcttggggggtacttctgaactctggtattggagaaggtgcccca
cggagcttttcggcaaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagataaattcatctacgccacggtg
aagcagagctctgtggacatttacttccggcgtcaagttgagctgagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgccgctgaggccatccaggctgtgcgagacggc
aaactccatgcttttatctgggattcagccgtgttggagtttgaagcctcgcagaagtgc
gacctggtcaccaccggagagttgttcttccgttcaggcttcggcatcggcatgcgtaaa
gacagtccttggaagcagaatgtttccctggccatcctcagctctcatgagaatgggttc
atggaggaccttgataaaacatgggtgagataccaggagtgtgactccaggagcaatgcc
ccagccacgctcacctttgagaatatggcaggcgtgtttatgcttgtggctggcggcatc
gtcgccgggatcttcctcatcttcatcgagattgcatacaaacgccacaaagatgctcgc
aggaagcagatgcagttggccttcgcagcagttaacgtctggaggaagaacctacagcca
tatcccacggacatcaccggccagctcaacctgtctgacccttccgtcagcacggtggtg
tga
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