Tachysurus vachellii: 132857655
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Entry
132857655 CDS
T09596
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132857655 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132857655 (tpra)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132857655 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
132857655
NCBI-ProteinID:
XP_060743600
LinkDB
All DBs
Position
15:16007648..16031436
Genome browser
AA seq
2343 aa
AA seq
DB search
MATALQQVLERNEISRLTKAAQSKLERFLTEKQRQLEELKTSHESYKADCEQQTASTEKK
IEELQEQLVSNSKECETLKEEKDQLTEELKKLKAADDEEGTLQQDKPSKAKYEIEAENRE
LSRLLDRKSQEMENLTDELKCTREKLEETSTMKMELQLKLDELQSSELSFQHREKRMEQE
KELLQNQNTWLNSELKSKTDELLTVTKEKGIEILQLKCSLESKTDEVTRLQTEVNTLKKT
NENLQKSTENLMAKLKEEKDQCIAMEEKYRNELNANMRLCNLYKSAAADSESKNAELNRG
LEELNKLLKKAMEANNISEKKLSELEGSQGKVEAELQEKIKNLEKEVENANTCLADFKRR
GVPALTEEDLTNLSPTAAIVAKIVKPGMKLMELYNAFVEAQDHLQLEKLENRRINKTLNE
IKSEVERKTSVIKRQKEEHEDMQKCMNSTSLKLEQATKEMSKLHEETNDVNKRSSLLEKE
NQRARKQIADLSHQVRVLLVELEEARGNKVVREEVNSAVSSSSEFQGLRQVAFRSVEELQ
QQNQNLLIQIRELEEQHEKSTAEAKIARQTEFEQKLEKARKELELLKEQRNQQKQVADSA
MRQRDMYRILLQTTGVDLPPQGTEGVSQSSTPSKPAVMITRSSTGQSVASEVAQAIQTKV
AFKQLNEAFATYKKEKAENDKLLNEQNERLQGQVSELISQKAKLSSQLEFASKRYDMLQE
NLNSYRREINSQREKIQKLTATSQKYEQIIHTMTQDLREANEKLAVVELRYENLRKERDL
LKRAESRLNQEKESILTEQRGQNLLLNNLKSIQLTMERSEAETRQRYANQIMQLEKEIAQ
QKKRVEQEVEQRHTVERNQDVQLVEAKKQLAAQNALHQKTKELLKSTEQQVSTLRQQLNN
LENQNGKQPVKSSSSAEAPGVPEQEVEELRARLQQTEDQNSDLQERLKSAQNNLEEYRTM
VLSLEDYISKDKQALEEARLSIENQLKEAQELNRQLEDRIAEAEREKQELHEEKLKAVEN
VEKHVKELKHSLTELQTELQDALQRATSAAAKEQQATQDCQQQAKLAIEAQNKYERELML
HAADVEALQAAKKQAQEAAKNLKELEEKVQKATAELQQGHTSWGQQEKSSKEELVKQEQR
VEDLQKQNKMLHEQMEQLSIKMAAIVQEQAAGEGMLNISFNEDDKSQEQVLEILRFVRRE
KEIAEARFEVAQVETQRYQQRMEHLEKELKEVQDSLTAERDKLQMTTKAMAQQEEKLKRL
ESLNALTETNKMLKEEKNRLEQELQQNRAKMHKLEADMRPLQEGNAELSEQSGMLQAEKR
LLEEDVKRWKTRTQQLINQQKDNNQEENKKLQTEKEAQVKRIQQLTEETAKLKSELARAN
ASATASQSQGQNLRENVGKLTTERDKLKKDLEAKIQDIQEKIKTITQVKKIGRRYKTQYE
ELKAQHDKMVAESAGKPAQVDEAVMEAQQASVQEIQSLKTSLNQAQSRTTDLEAQVDNMQ
KAAGEREAEVKGLQEQLAQIQPELTRLRTELQEKSGQVDQLKQQNTEKDEKTKKAILVAK
QRISLLNSIKEKLTKENEELKQQREELDVRMSALKSQFEGRLSRQEREIRELREQQERHG
EQRDEPLEQGPSKAQEQQRPSESRQITLKPTPAADRGSASTSEPPTANIKPTPVSGAASK
ASSIPGSKATPRASIRPMITPAPVTTPTPTATVMPTAQTETQEAQQPSETPVEHVTVFGS
GSVRSTSPNVQSNVQSTQSIITLQQNQATAFVQPTQQQTSQEPAVPMVEAVHSSQMERPS
TSTAVFGTVSASAGSSLQKRIREEELESTTEVTESTQDDLNEPPMAKKIRFIRVLEGDID
TEGSNDAVAEAPEVTFEAPDASEVVYGVLGVEETLSQSVPLDQVSESQESTYEHRHDVII
IETDSNSDEEGGVEETEQEYGEEEEEEDEDEEGVMAEGEESNEGSGDVNEPFDGEDTETA
EATEPGTENEESQGTSGTTQKHTDPQISGETSVSTMEPSTVVEPVREVQPSPSTISTTSS
SLTSQGPRLPQSPRRPHQTPPPRLNIHPVPELGPPLIQRQSGQTRRPSTSRVPQLTPGIG
SMQQHFFDDDDRMVPSTPTLVVPHRNDGFAEAIHSPQVAGVPRFRFGPPEDMIPQTSSSH
SDLGQLASQGGLGMYESPLFLAAHDEESGGRSVPTTPLQVAAPVSVFAESQPSDVAEPAS
QSVPMVSTSTAAMSGPGEAVPGDDADDVFMAEAESEGTSGEASLESQSELEPAQPSDDAS
LPSTSQEPTSSSAPDISSSQQPRSAERARRENAQPARRAQLIRRGVGFPRGGRGRGFSRG
TPF
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggctttgcagcaagtcttggaaaggaatgagataagcagactgaccaaagca
gctcagagcaaactcgagaggtttctcacggagaagcagcggcagttggaggagctcaag
acaagccatgagagctataaagcggactgcgaacaacagacagccagtactgaaaagaag
atagaggagctgcaggaacagcttgtgtccaacagtaaagagtgtgagactcttaaagaa
gagaaagaccaactcactgaagaactcaagaaactaaaagcagctgacgatgaagaagga
acattgcagcaggataaaccttcaaaagccaaatatgagattgaagcagaaaacagagag
ctgtctcggttgctcgacaggaaatcacaagagatggaaaatctcactgatgaacttaag
tgtaccagggagaaactagaggaaaccagcacaatgaagatggagcttcagctgaaactg
gatgaactccagtcatctgagctttcatttcagcatcgggagaagaggatggagcaagag
aaggagcttcttcagaaccagaacacgtggttgaactctgagctgaaaagcaaaacagat
gagcttctcacagtgacaaaagagaagggtatagagatccttcagcttaaatgctcactg
gagagcaagaccgatgaggtgacccgacttcagacggaagtcaacacactaaagaaaaca
aatgaaaacctgcagaagtcgacagagaacttgatggccaaactaaaggaggagaaagat
cagtgcattgcaatggaggaaaaatatcgcaatgagctgaatgccaacatgagactctgc
aatttatacaagagtgcagcggctgactctgagagcaagaatgcggaactgaatagaggt
ttggaggagcttaacaaactgttaaagaaggcaatggaagctaacaatatttctgagaag
aaactctctgagctggagggttcccaaggtaaagtggaggccgagctacaggagaagatt
aaaaatttggagaaagaagtggagaacgccaatacatgccttgcagacttcaagcggaga
ggagttccagctctcactgaagaggatctgaccaacttgtctccaactgcagctatagtg
gccaagattgtaaaacctggcatgaagcttatggagctgtataacgcgtttgtggaggct
caggaccacctgcaactggagaagttggagaaccggcgtattaataagacgctgaatgaa
attaaatcagaggtggaacgtaagacgtctgtaataaagaggcagaaggaggagcatgag
gacatgcagaagtgcatgaacagcaccagtttaaaacttgagcaagccacaaaggagatg
agtaaactacatgaagaaactaatgatgtaaataagcgatcttccttgctggagaaggag
aatcagagggcaaggaaacagatagcagacttgtctcatcaggtgagggtgttgcttgta
gagctggaggaggcacgtgggaacaaagtggtgcgtgaggaggtgaactctgccgtaagc
agcagctctgagtttcaaggcctgcgtcaggtggcctttcgcagtgtagaggagctccag
cagcaaaaccagaacctcctgatccagatacgagagctggaggagcagcatgaaaagagc
acagctgaagcaaaaattgccaggcagacagagttcgagcaaaagctggagaaggctcgg
aaggagttggagctcttgaaggagcaaaggaaccaacagaagcaggtggctgactccgcc
atgaggcagagagacatgtaccgtatcctcttacagacgactggggtcgaccttcctcca
cagggcacagagggtgtctctcagtcctctactcccagcaaacctgcagtcatgattacc
cggtcctctacaggccagtctgtggcttcagaggtggcccaggccatacagactaaagtg
gctttcaaacagctaaatgaagccttcgcaacctacaagaaggagaaggccgagaatgac
aagcttctgaatgagcagaacgagcgcctgcagggtcaggtgtctgaactaatttcccag
aaggccaagctctcttctcagcttgaatttgcctctaagaggtatgacatgcttcaggaa
aatctgaacagctacaggagagagatcaactcccagcgggagaagatacagaagctcact
gccacatcccagaaatatgagcagatcatccacaccatgactcaggatctgagggaagcc
aatgaaaaactagcagtagttgagttgcgatatgaaaacctacgtaaggagcgtgacctt
ttgaagcgggctgagagccgacttaaccaggagaaggagtccatcctgactgagcagcgt
ggacagaacctattgctcaacaacttaaagtccatccagctaactatggagcgctctgag
gcagaaaccagacaacgctatgctaatcagatcatgcagttggagaaggagatcgcacag
cagaagaagagagttgaacaggaggtggaacagaggcacactgtggagcgcaaccaagat
gttcagctggtggaggctaagaagcagctggcagcacagaatgctctgcatcagaaaacc
aaggagctactgaagagcactgaacagcaggtttccactctgagacagcagctaaacaac
ttggagaatcagaatggcaagcagccggttaaatcctcatccagtgctgaagctcctggt
gttcctgagcaggaggtggaggagttgcgtgcacgtctgcagcaaactgaggaccagaac
tcagatctgcaggagcgcctgaaaagcgcacagaacaacctagaagaatacaggaccatg
gtgctcagtctggaagactacatcagcaaggataaacaagcacttgaggaggcacgccta
tccatagaaaaccaattgaaggaggcccaggagcttaacaggcagctggaggaccggata
gctgaggcagaaagggagaagcaggagctgcatgaggagaagctcaaggctgtggagaat
gtggagaagcacgtaaaagagctgaaacatagtctgacagaattgcagactgagctacaa
gatgcactacaaagagcaacatctgctgcagccaaggagcaacaagccacacaggactgc
cagcagcaggctaagctggccatagaggcacagaataagtatgaacgggagctcatgctg
catgctgctgacgtggaggctttacaggctgctaagaaacaggcccaagaggcagcaaag
aatctcaaagagctggaggagaaggtccaaaaggccactgctgagctccagcagggccat
acgagctgggggcagcaagaaaaaagctcaaaggaggagctggtgaaacaggagcaacgt
gttgaagaccttcagaaacaaaacaaaatgctccatgagcagatggaacagctgagtatt
aaaatggctgccattgttcaggagcaggcagccggagagggcatgctaaacatttctttt
aacgaggacgacaaaagtcaagagcaggtccttgagatcctcagatttgtgcgtcgggag
aaagagatagctgaggctcggtttgaggttgctcaagtagaaacacaacgctaccagcag
cgcatggagcacctagagaaagagctgaaggaggtccaggacagcctgacagctgagcga
gacaaactacagatgactacaaaagcaatggctcagcaggaggagaaactgaaaaggctg
gagagcttgaatgctttgactgagaccaataagatgctgaaggaggagaaaaaccggttg
gaacaagagctgcagcagaaccgggccaagatgcataagctagaggcagacatgaggcct
ctgcaggagggcaatgccgagctgagtgagcagagcggcatgctgcaggctgagaagcga
ctcctggaggaggatgtcaaacgctggaagactcgcactcagcaactgataaaccagcag
aaagataacaatcaggaagaaaataagaagctccaaacagagaaggaggcccaagtcaaa
cgcatccagcagctaacagaggagacggccaaactaaagagcgaactggccagggcaaat
gcttctgcaaccgcatcacagagtcaaggtcagaacctgagggagaatgtggggaaactc
accacagagagagacaagcttaagaaagatctggaagccaagattcaggacatccaggag
aagatcaaaaccatcactcaggtcaagaaaatcggccgccgctacaaaacccagtatgag
gagcttaaggcacagcacgacaagatggttgcggaatcagctggtaaacctgcgcaagtg
gatgaagcagtgatggaggcacagcaggcttcagtgcaggagattcagagcctaaaaaca
tccctgaaccaggcccagagtagaaccacagacttggaagctcaggtggataacatgcaa
aaggctgcaggagagcgggaggccgaggtgaagggtcttcaggagcaacttgcgcagatt
caaccagagttgacgcgtctccgtacagagcttcaggagaagagcggtcaggtggaccag
ctaaaacagcagaacactgagaaagacgagaaaaccaagaaagccatcctggtagcaaag
cagaggatcagcctgctcaacagtatcaaagagaagctgactaaggagaatgaggagctg
aagcagcagcgagaggagttggatgtaaggatgagcgcactgaagtctcaatttgaaggc
aggcttagccgccaggaacgtgaaatcagagagttgcgtgagcagcaggagagacatgga
gaacaacgtgacgagcctctggagcagggaccaagcaaggctcaggagcagcagaggcca
tctgagagcagacagatcacactgaagcctacacctgcagctgacagaggaagtgcaagt
accagtgagccacctacagcaaacattaagcccactcctgtatctggagcagccagcaaa
gcttcttccattccaggcagcaaggccacgccaagagcaagcatcagaccaatgataacg
ccggctcctgttactacaccaactccgaccgcgacagtcatgcccacagcccagacagaa
acacaggaggctcagcaaccgtctgagaccccggtggaacacgtgaccgtgtttggtagt
ggctctgtgcgctccaccagtccaaatgttcagagtaatgttcagagcactcagtcaatc
atcacgctgcagcagaaccaagccacagcctttgtccagcccactcagcagcaaaccagt
caggaaccagcagttcccatggtggaggcagtgcacagctctcagatggagagaccctct
acctccactgctgtattcggtacagtgtctgcgagtgcaggttcatctctgcaaaagcgg
atacgtgaggaagagctggaaagcaccactgaggtgactgagagcacacaggatgatcta
aacgaaccccctatggctaagaagatccgtttcatccgagtcctggagggcgatatcgac
acagagggcagtaatgatgcagtagctgaagctcctgaagttactttcgaagccccagat
gctagtgaggtagtctacggtgtattaggtgtagaggaaaccctttctcagtccgttccc
ttggatcaggtgagcgagtctcaagaatcaacctacgagcacaggcatgatgtcatcatc
atagagacagacagcaacagtgatgaagaagggggagtagaggagactgaacaggagtat
ggagaagaggaggaggaggaggatgaagatgaggagggtgtgatggcagaaggagaggag
agtaacgaaggcagtggggatgtcaatgagccatttgatggcgaggacactgagacagct
gaggccaccgagccaggcactgagaacgaggagagtcagggaacatcaggcaccactcag
aaacacaccgatcctcagatcagtggtgaaacaagtgttagcacaatggagccatctact
gtagttgagcctgtgagggaggttcagccttcccccagcacgatcagtaccactagcagc
tccttgacctcccagggacctcgactgcctcagtcacctcgcagaccacatcagacaccc
ccacctcgcctcaacatccaccctgttcctgaacttgggcctccactcatacagaggcag
tcgggccagactagacgcccatcaacgagccgtgtaccccaactcacgcctgggatagga
agcatgcagcaacacttcttcgatgatgatgaccgtatggttcccagcactccaactcta
gtggttcctcaccgcaatgatggctttgctgaggctattcattctcctcaggttgctggt
gtccctcgtttccgttttggtcctccagaggacatgattcctcagacaagctcatctcat
tctgatctgggacagctggcatctcagggtggtttgggcatgtatgagagtcctctcttt
ctggctgctcatgatgaagagtctggaggcagaagtgttcccaccacacctttgcaggtt
gcagctccagtgagcgtttttgccgagagtcagccatcagacgtggccgagccagcctca
cagtctgtcccaatggtcagtacatccacagcagccatgagtggacctggagaagctgtt
cctggggatgatgctgatgatgtctttatggcagaagcagaaagtgaaggaacgagcggt
gaggcgtctttggagagccaatctgaactggagcctgctcagccctctgatgatgcaagc
ctgccctctaccagccaagagccaacctccagctctgctccagatatcagcagcagtcag
cagcccaggtctgcagagagagctcgcagagaaaatgctcagcccgcacgcagagcccag
cttatcaggagaggtgtaggttttcctcgtggtggtcgtggccgaggcttcagcagaggc
acgccgttctga
DBGET
integrated database retrieval system
