Tachysurus vachellii: 132863940
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Entry
132863940 CDS
T09596
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132863940 (cacna1ha)
04020 Calcium signaling pathway
132863940 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132863940 (cacna1ha)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132863940 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
132863940
NCBI-ProteinID:
XP_060753032
LinkDB
All DBs
Position
21:complement(5573805..5662178)
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AA seq
2316 aa
AA seq
DB search
MTDGEGRERFQYLESGEVRVPVAVLYRAHGHGQAAEDEEKGSTWGPDGSEGSNSSETRGG
GGGDAPAPDGGSEEQEQQPYPALAPVVFFCIKQTTRPRNWCLRVVCNPWFEHVSMLVILL
NCVTLGMFQPCEDVACQSEWCIILQAFDDCIFAFFAVEMVIKMMALGIFGSKCYLGDTWN
RLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGN
VLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDNNAKDLYNLSFMSPYYMHEDGEESPFICS
TIINGMLKCTDVPHYKEGEMECDLNASLGHTLSGPDIKNGCVNWNQYYSVCQPGELNPHK
GAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLV
VIATQFSETKQRENQLMQEQRARYMSNDSTLASYSEPGSCYEELLRYISHLYRKVKRRAY
RLYHGWQSKRRKKVNPNSGGLPGGGGANGHGRQKSGGHWARSVHNLVQHHQHHHCHLSNG
SPSPQAIAESTDVLEMRFITSGVQLTVPSQSPPGLDLSPGCQSVHSIFQGDFHEAPQICT
GTTAGVTPLGRFNGGMNYPTILPSFICSYTGSNVTAKGRLEANNSTADIVDPFEKIQHLT
GEHSHRRLMLQMAGVEPTSLLFEVLGCPYCAQALENIDLDLADSECSQSEGEVVHEFSRR
ARFKLGHLRHHKKLEERNRLMRCWENFRDRMKRIVDSKYFNRGIMIAILINTLSMGIEHH
KQPDELTDVLEISNIVFTSMFVLEMIFKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQ
ADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMH
LFGCKFSLKLENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAALYF
VALMSFGNYVLFNLLVAILVEGFQAEGDATKSDGDEEKRSVNFEEEEKMGELRATAELKM
YSLMMSANGHVDTHGNLPPPIIMRTAATPMPTPKSSLGTDSIFSLGELRRGSGISIDPIA
YDQRSLASPRKSPCHPCSTSSNWGSRRSSWNGLSRAPSLKRKDTSGERESLLSGEGRGSF
EDEEPGGIMLGKTGSASGSSLHHPSSLDFPELPTLPSLCPSGEYHDCNGRALHLSRELPS
ELSREDSTTEEDLDDSFCFRLKRMLHAYKPKWCKSHEDWSLYIFSPRNKFRMLCQRIISH
KIFDHVVLVFIFLNCITIALERPHIQSNSPERLFLSISNYVFTVIFVAEMTVKVVALGFY
SGKHSYLQSTWNVLDGVLVFVSLIDILVSLASTGGNKIFGILRVLRLLRTLRPLRVISRA
PGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTRNITNKSDC
LQANYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLL
YFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLMEKRRRKAQQRPY
YADYSPARLYIHTLCTNHYLDLFITFIICINVVTMSIEHYNQPMYLEEALKYCNYVFTVF
FILEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINPTIIRIMRV
LRIARVLKLLKLATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECTDN
NPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTSDDKQCLSYLPLVSPMY
FVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKDDAEMDAEIELEMEMARRLSNVSARSSG
GPECRGTYMGPRAHSPRQDERMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPVRPASAPY
PLQEVQPTQAYLELGSVTSIHSQPCEGHSLLQVPGVHPQPHISICMPRIPTPKSSPLHVV
GRPLRRQEAIKNDSIDVQMYDSKGNPDKHVRSTRASMMLPVPQISSPSSPLVSHFLPSYC
DMSSVCTLQHSQQQRIIPLPSSRASSSPSDSMLDMADPADEEVHHINSSARLWAGFPAEG
RCHSLSPYIAPWPLPVKNCTSATNLTGYNTKDKDFKFFSVDTRGFLDKPSCCEDHRRHSI
EICSSVDNNAFEQDVGEKRYLPIRGQSLHIHRKKKMSPPCISVDPPLEMELPPSLASMKK
LSESTLLRRRTPSYELALQRDSLEFLEHQLPSRPFIKMERQISHCGEYLSLPRFPFHKSD
SSSCILRESNPSAQPPRFDSALEESTDFSTVNRTAQ
NT seq
6951 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgaagggagagagcgctttcaatacctggagagtggtgaggtgagagtt
ccggtggcggtcttataccgggcgcacggacatggccaagctgccgaggatgaggagaaa
ggcagcacatggggcccggatggctctgaaggctctaacagctctgaaactcggggtggt
ggtggcggtgatgcccctgctccggatggtgggtctgaggagcaggagcagcagccgtac
cctgcgctcgcgcctgtcgtctttttctgcatcaaacagacaacgcggccacggaactgg
tgcctccgggtggtttgtaacccctggttcgagcatgtgagcatgctggttattcttctg
aactgtgtgaccctgggcatgttccagccctgtgaggacgtcgcgtgccagtctgagtgg
tgcatcatcctccaggcattcgatgactgcatctttgcctttttcgctgtggagatggtt
atcaagatgatggctctggggatttttggatctaagtgttaccttggagacacttggaat
cgcctggacttctttattgtcatggctgggatgatggagtactcactggatgggcacaat
gccagcctgtcagccatccggactgtgcgtgtactcaggcctctacgagccatcaacaga
gtccctagtatgaggatactggtgactctgctcctagatactctgcctatgttaggcaat
gtcctcctgctgtgcttttttgtgttctttatattcggcattgttggggtgcagctttgg
gctggtcttttaaggaacaggtgtttcctggacaacaacgcgaaggatctgtataatctg
tccttcatgagtccatattacatgcatgaggacggggaggagagcccatttatctgctcc
actataattaacggcatgctcaagtgcaccgacgtgccccattacaaggagggtgagatg
gagtgcgatctaaatgcatcccttggacacaccttgtctgggcctgatatcaagaatggt
tgtgtgaactggaaccagtactacagtgtgtgtcagcccggggagctcaaccctcacaaa
ggggctgtgaattttgacaatattggatatgcttggattgctattttccaggttatcact
ttggagggatgggtagacatcatgtattatgttatggatgcccattccttttacaatttt
atatattttatattgcttattatagtgggatctttcttcatgatcaatttgtgcctggtt
gtgatcgcaacccagttctcggaaactaagcagcgagagaaccaactaatgcaggagcag
cgtgcacgctacatgtccaacgacagcacactagccagctactcagagcccggcagctgt
tatgaggagttgctcaggtacattagccacttgtaccgcaaggtgaagcgtcgtgcatac
cggctctaccatggctggcagagcaagcgtaggaagaaggtcaaccccaacagtggcggc
ttgccagggggtggaggggccaatgggcatggcagacagaagagtggtgggcactgggca
cgttctgtccacaaccttgtccagcaccaccagcaccaccactgtcaccttagtaatggc
agcccaagcccccaggcgatagcagaaagcactgatgttctggagatgaggtttatcaca
tcaggagtacaactgacagtgccctcgcagtcacctcctgggttggatctatcaccagga
tgccagtcagtgcacagcatctttcaaggtgactttcacgaggccccacagatttgcaca
ggcaccacagctggagtgactcctctggggagatttaatgggggcatgaactatcctacc
attttgccatccttcatctgcagctatacaggcagcaacgtcacagccaaaggtagactc
gaggccaacaacagcactgcagacatcgtggatccatttgaaaagatacagcatctgaca
ggagagcacagtcacaggcgcttaatgctgcagatggccggggtagagccaacgtcccta
ctctttgaggttctcgggtgtccatactgtgcccaggctctggagaacattgatctggac
ttagctgactctgaatgctcccagtctgaaggcgaggtggtgcacgagttttcccgccgt
gcaaggtttaaactcggacacttgcgtcaccacaagaagcttgaggagcgcaaccggttg
atgcgctgctgggagaacttcagagacaggatgaaacgcatagtggatagcaagtacttt
aaccgtgggattatgatcgctatcctcatcaacacattgagcatgggaatagagcatcac
aagcagcctgatgaactgacagatgttctggagattagcaatattgtctttaccagcatg
tttgtccttgagatgatcttcaagctgttggcctttggtctcttcggctacatcaaaaac
ccatataatatctttgatgggatcattgttgttataagtgtatgggagattattggacag
gctgatgggggtctttcggtgctcaggacctttcgtctgttgcgtgtgctcaagctggtg
cgcttcctacctgctctgcggagacagctggtggtcctgatgaagacaatggataatgtg
gccaccttctgcatgctgctcatgctcttcatcttcaccttcagtattcttggaatgcat
ctgtttggctgcaaattcagcctgaagttggagaatggagacaccattccagacaggaag
aactttgactctctgctgtgggccatcgtcactgtgtttcagatactaactcaggaggac
tggaacgtggtcctctataatggaatggcatccacgtctccactggctgcactttacttt
gtggccctgatgagctttgggaattacgtcctatttaatcttctggtagccatcttggta
gagggctttcaagcagagggagatgccaccaaatctgacggagatgaggagaagaggtca
gttaattttgaagaagaggagaagatgggagaattacgtgccacagcagagttgaagatg
tactctctgatgatgtctgcaaacgggcatgtggacactcacggtaatttgcctccaccg
atcatcatgcgcacagctgccactcctatgcccacaccaaagagctcgcttggcacagac
tccatcttcagtttaggggaattaaggcgtggcagtgggatttccattgatccaattgct
tacgatcagagatcactggccagcccacgtaaatcaccctgccacccgtgtagtacaagc
agtaactggggcagtcgcaggtcaagctggaacggcctgagtcgagcaccaagtctaaag
aggaaagacacatctggggagagggagtctctgctctcaggtgagggtagaggcagcttt
gaggatgaggaaccagggggaatcatgctgggaaaaacaggaagtgccagtggtagctct
ctgcaccaccccagttctctggactttcctgagctgccaacactccccagtctgtgccca
tcaggagagtaccacgactgcaacggcagggcactacacctctccagagagctgccctct
gagctgagccgcgaggactcaaccacagaggaggatctagatgatagtttctgttttcgc
ctgaagaggatgctgcatgcgtataaacccaagtggtgtaaaagtcatgaggactggtct
ctctatatattctctccacggaacaagtttcgaatgctctgccagaggatcatttcacac
aagatttttgaccatgtggtcttagtctttatcttccttaactgtatcactattgctctg
gaaaggccacacattcaatccaacagcccagagcgactgttcctcagtatttccaattac
gtattcactgtgatatttgttgctgaaatgactgtgaaggtggtggctcttggcttttat
tcaggaaagcacagttatctacagagcacctggaacgtcttggatggagtgttggtgttt
gtttcactcattgacatcctggtgtccctggcatccactggagggaacaagatctttggg
attctgagggttctacgtctactaaggacactgaggcctttaagagtgatcagtcgcgct
ccaggactgaagctggtggttgaaacgttgataacgtcactgaggcccatcgggaacata
gtactgatctgctgcgcgttcttcatcgtctttggcattcttggagtgcagctcttcaaa
ggcaaattttaccactgtgaaggcttggacacaagaaacatcaccaataaatcagattgc
ctgcaagccaactacaaatggattcggagaaagtacaatttcgataatttggggcaggct
ctcatgtcgttgtttgtgctgtcttgtaaggacggctgggtgaatatcatgtacgatggc
ctggatgctgtaggtgtagaccagcagccggtacgtaaccacaacccctggatgctgctt
tacttcatctccttcctgctgattgtgagcttcttcgtgctgaacatgttcgtgggtgtg
gtggtggagaacttccacaagtgtcgacaggaccaggaagaagaggaggcgcgcctgcgt
gaggagaagaggcagcggttgatggagaaaaggcgcaggaaagcacagcagcggccctac
tacgcagattactcaccagcccggctctacatccacacactgtgcactaaccactacctg
gacctctttatcaccttcatcatctgcatcaacgtggtcaccatgtccatagagcactac
aaccagcccatgtatctagaagaagcgttgaagtactgcaactacgtcttcactgtcttc
ttcattttagaagcccttctcaaacttgtcgcatttggcttccgaagattcttcaaagac
aggtggaaccagttagacctggccattgttcttctctccatcatgggcatcacattggag
gagatcaaaatgaacgctgctcttccaatcaaccccactatcatccggatcatgagggtt
ctgagaatagcccgagtgctgaagcttttgaagttggctacaggcatgagagcattgctg
gacactgtgatgcaggctctaccacaggttggaaatctgggcttgctgtttatgcttctc
ttcttcatttatgctgcactcggcgtagagctttttgggaaattggaatgcacagacaat
aacccatgtgaaggactcagtcgacatgccacgttcgagaactttggaatggccttccta
accctcttcagagtttcaactggtgataattggaatggtataatgaaggacactctgagg
gagtgtacttcagacgataagcaatgcctgagctacctgcccttggtatcccctatgtac
tttgtcacctttgtgctgatggcccagtttgtgctggtgaatgtggtggtggctgtgttg
atgaagcacctggaggagagcaataaggaggccaaagacgatgctgagatggacgcagag
attgagctggagatggagatggctcgacgtctcagtaacgtttcagcaaggagctctggt
ggtccagagtgcaggggcacgtatatggggccaagggcacattcacctagacaggatgag
cgaatgcaaagaactcaggagaatttgctatcaccacgaaagatgtcagtgtccaggatg
cattctttgcctaatgacagttacatgtttcggcctgtgaggccagccagcgcgccgtac
cctctgcaggaagtgcagccaactcaagcatacctcgaattaggctcagtgacctcgatc
cactcacagccttgtgaaggtcattccttgctccaggttcctggtgttcatcctcagccc
catattagtatttgcatgcctaggatccccactccaaagtcatctcccctgcatgttgta
ggcaggcctctacgtagacaggaagcaatcaaaaatgactcaatcgatgtgcaaatgtat
gactccaaaggcaacccagacaagcatgttaggagtacaagagccagcatgatgcttcca
gtgccgcagatctcctcccccagcagccccctggtgtctcatttcctaccctcttattgt
gacatgtccagtgtctgcacgctccaacactctcaacaacagagaattatccccttacca
tccagccgggccagcagcagccccagcgactctatgttggacatggcggatccagccgat
gaggaggtgcaccatatcaacagctccgccaggctgtgggcaggattcccagcagagggc
cggtgccactctctgtctccctacatcgcaccgtggccgttgcctgtgaagaactgtacc
agtgccaccaatcttaccggctacaacactaaagacaaagactttaagttcttcagtgtg
gacaccaggggatttttggacaagccctcctgctgcgaggatcatcgccggcactctatt
gagatttgctcttcagtggacaacaatgcatttgagcaagatgtaggtgaaaagaggtat
ctgcccattcgtggacaatcattgcacatccacagaaagaagaagatgagtcctccttgt
atctctgttgacccgccactagaaatggagctcccgccatctctcgcgtccatgaaaaaa
ctgtccgagagcacgctactgcgtcgaaggacgccatcgtatgaactggccctacagcgt
gactctctagaattcctggagcaccaactcccaagtcggcctttcatcaaaatggagagg
caaatctcacactgtggtgaatatctctctctcccacggttcccctttcacaagtcggac
tccagttcctgcatcctgcgtgaaagcaacccatccgcacagccgcctcgcttcgacagt
gcactggaggagtccacagatttcagcacagtaaacaggactgctcaatga
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integrated database retrieval system
