Thalassomonas viridans: SG34_012000
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Entry
SG34_012000 CDS
T08831
Name
(GenBank) ATP-grasp domain-containing protein
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
tvd
Thalassomonas viridans
Pathway
tvd00907
Pinene, camphor and geraniol degradation
tvd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
tvd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SG34_012000
Enzymes [BR:
tvd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
SG34_012000
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
ATP-grasp_3
RimK
Motif
Other DBs
NCBI-ProteinID:
WDE07535
LinkDB
All DBs
Position
complement(2685783..2687855)
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AA seq
690 aa
AA seq
DB search
MITSALNQNFTKILIANRGEIAVRIIKTAKALGYQTVAVFSDADSASPHVSLADYAVHIG
AANVSESYLDIDKIIQAAKQTGAQAIHPGYGLLSENAAFARACRDNNLIFIGPHSDAIEL
MGDKQQAKQAMLAADIPCIPGYQGAGQSNEVLRQEAEKVGFPLMIKAAAGGGGKGMRLAQ
NLDDIETLFNSARSEALASFGSEQLILERALINARHIEIQVVRDQQGNCIHLGERDCSMQ
RRHQKVIEEAPGIDISDRLREKMGKAAVKVADSCDYLGVGTVEFLLVQDGQEERFYFLEM
NTRLQVEHPVTEMITSIDLVKWQIDIAHGKALPLTQEQVSFNGHAMEARLYSEDPANNFM
PQSGQLTFWQSPESQLQEQDIRCDHMLTPSACISRFYDPMLAKIIVWGQDRDQARRRLIQ
ALHQTHLHGIKHNKDFLLELANSRAFTGQDDESSVHTRFIDDNLKTLKSCNQKPLTAGQW
ALAAVLNYLLQANHRPSQALALPLSKQMLLHCDTAPEESKQQSISITPLSSSENISHQGF
YRVSLDGEVIEVTVIDFGENNFTCQINGLRENYFFSRHQQQLTISGQDFDFSISDISYHN
RQSSTGASSDAGQGGQHFAPMNGTVVSVEKSPGDIIQQGEVLFTIEAMKMELPVKASCSG
TLTRLNLEKNQQVASGQLLATISAEEEVTE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccagtgccctaaatcaaaactttaccaagatcttaatcgccaaccggggcgag
atagcggtacgcatcatcaaaaccgcaaaagccctgggttaccagacagtagccgtgttc
agcgatgccgacagcgccagcccccatgtttccctggccgactacgccgtacatataggc
gcagccaatgtcagcgaaagctatctggatatagataaaatcatccaggccgccaaacaa
accggcgctcaggcgatacatccgggatacggcttattatcggaaaacgccgcttttgcc
cgcgcctgccgggacaataacctgatttttatcggtccgcatagcgatgccatcgaactc
atgggggataaacaacaggccaaacaggcaatgctcgccgccgacattccctgcattccc
ggttatcagggagccgggcaaagcaatgaggttttacggcaagaagcagaaaaagtcggt
ttccccttaatgatcaaagccgcagccggtggcggcggcaaaggcatgcgcctggcacaa
aaccttgatgatatagaaaccttgtttaacagtgcccgcagcgaagccttggcaagtttt
ggcagcgagcaactgattttagagcgagccctgatcaatgcccgccatatcgaaatacag
gtggtccgcgatcagcaaggcaactgcattcacctgggggagcgggattgctcgatgcag
cgacgccaccagaaagtgattgaagaagccccgggaatagacatcagtgacagactcagg
gagaaaatgggcaaggcggcagtcaaggttgccgacagctgcgactacctgggcgtaggc
acggtggaattcctgctggtacaggatggacaggaagagcgcttttacttcctggaaatg
aatacccggctgcaggttgagcacccggttacggaaatgatcaccagtatcgatctggtg
aaatggcaaatcgacatcgcccacggcaaagccctgccgttaacccaagagcaggtcagc
tttaacggtcatgccatggaagccaggctgtacagtgaagatcccgccaataactttatg
ccgcaaagcggccaactaacgttttggcaatctcccgaaagccagcttcaggaacaagat
atacgctgtgatcatatgctgacgccaagcgcctgtatcagccgcttttacgaccctatg
ctggcgaaaatcatcgtctggggacaagacagggaccaggcccgcagacgcctgatccag
gccctgcaccagacccatttgcacggcatcaaacacaataaagactttttgctggaactg
gccaatagccgggcctttaccggccaggatgacgaaagtagcgttcacacccggtttatc
gacgataacctgaaaacgctgaaaagctgtaatcaaaaaccgttaactgccgggcagtgg
gcattggcagctgtgctcaactatttattgcaggcgaatcaccggccaagccaggcgctg
gcattgccgttaagcaaacaaatgctgttgcactgtgatactgccccggaagaaagcaag
cagcaaagcatcagtattacgcctttgagtagcagcgaaaatatcagtcatcagggcttt
taccgggtaagcctggacggggaagtcatagaggtcaccgtcatagatttcggcgaaaat
aacttcacctgccagataaacggcctgagggaaaactattttttcagccggcatcaacaa
cagctgaccatcagcgggcaagattttgattttagcatcagcgatatcagctatcacaac
cgtcaaagcagtaccggtgcctcatcagacgccggacagggagggcagcactttgccccc
atgaacggcactgtggtatcggtggagaaatcccccggggatattatccagcagggcgag
gtcttattcaccatagaagccatgaaaatggaattgccggttaaagccagctgcagcggt
accctcacccgtttaaacctggaaaaaaatcagcaggtggccagcgggcaattgctggcg
accatctcagccgaagaagaagttacagaataa
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