Trichophyton verrucosum: TRV_03535
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Entry
TRV_03535 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tve
Trichophyton verrucosum
Pathway
tve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRV_03535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tve03021
]
TRV_03535
Enzymes [BR:
tve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TRV_03535
Transcription machinery [BR:
tve03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
TRV_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
9580871
NCBI-ProteinID:
XP_003022324
UniProt:
D4D8U7
LinkDB
All DBs
AA seq
1444 aa
AA seq
DB search
MMATDALPVDPGKAQVIDRVPKVIKEINFGVLSNQDIISQAHVEISDRKLFDLDNNRAVA
RNGPMDPRLGISNKSDTCETCGGDLQECNGHFGYVRLVLPAFHVGYFKRTIEILQDICKD
CSKILLPEDERRSYLKELRRPGLDNLRRMQINKRINVRCRKTPVCYYCNAINGTVKKAST
GALKIVHDKFRAFNASLSAKKIPPPSKLAFDRSFEEAKKSNPDIEKHYRRVFDDLNPLRV
LKLFRRISNEDCELLSLNVDGARPEYFLWQFIPAPPVPIRPSVGQEGPSTEDDLTAKLGD
IVQSNLNLKMALDKGAPVQTIIECWDYMQLQIAVYINSDIPGLQNTDSKKTIRGLCQRLK
GKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPQLVAMNMTYPERVTRYNKEKLRQ
RIRNGTKTWPGANYLIKEGNSFRLFLKYGNLNMIANQLREGDIVERHLENGDIVLFNRQP
SLHKLSILSHFVKVRPHRTFRLNECVCNPYNADFDGDEMNLHVPQTEEARAEAMELMGVK
SNLATPKNGEPIIAAIQDFITAAYLLSSKDNFFDRKTFTQICLSMLDSSTRFELPPPATI
KPQMLWTGKQVFSVLMRPNKDCPVKVNLDAACRQLKLVKGQPRDLCENDGWLCIRNSEML
CGVADKSTIGAGKKDNIFFVIQRDFGYAAAAEAMNRLSKLSARWLTNKGFSIGITDVYPG
ESLVKLKDTLINTAFQQCDDLIAAASKEKPQMGKSDSRQTAENEITGILNKVRQQAGEYC
ISEVSKHNAPLIMATCGSKGSNINVSQMVAVVGQQSIENARVSKGFQDRTLPHFARHSQH
ALAKGFVRNSFFSGLTPTEFLFHAMSGREGLIDTAVKTAETGYMSRRLMKSLEDLSTRYD
NTVRDSSSFIIQFQYGDDQLDPVNMEASAKPVHFDRTFTHAESTTYDKDEKGLSADEILA
LCEELIAPERKKLVRYDLLGNTLSYKAENDFATDQWESNRDFLSSIEEYVAAKAAQLRPS
DNEEGKEQMAFTHTSKISARTLKAFITSCLDKYMRAHVEPGHSIGAIGAQSIGEPGTQMT
LKTFHFAGVAGMSITQGVPRIKEIINASKEISTPIITCELVNKTDMRIAEIVKGRVEKLF
LKDIVYYIEENRSQTSSFINIKVDFSTIKKLQLELTLRQILLAIKKHKAFKAADLTFRSF
NSHIHIYVDEGASMAGVSVSEQKITGSDPYIRINYLRRILPNIQVFGYPDCTRAVIRVGE
KVATNILLVEGYGLRACMTTDGIEGHRTRTNHVMEMRDVLGIEAARTTIIDEISSVMSGM
AIDPRHMQLLADVMTYKGEVLGITRFGLAKIRDSVLQLASFEKTADHLFDAGGAGRRDTV
QGVSECIIMGKTISLGTGSMEVVRDLKLLDSHVGKKKTVFDDAWRDICEPKQRRRALPRM
AMAC
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacagatgctctgcctgttgacccgggcaaggctcaggtcatagaccgggtg
cccaaggttattaaagagattaacttcggtgtcctttcaaatcaggacatcatcagccag
gcgcacgttgaaatctcggatagaaagctttttgatctcgataataatcgcgccgtcgct
cgaaatggccctatggaccctcgccttggtatatctaataagtcagatacttgcgaaacc
tgcggtggtgatctacaggaatgtaacgggcacttcggatacgttcgactcgtccttcct
gctttccacgtcggatactttaagcgcactatcgagatattacaggatatttgcaaggat
tgctccaagattttgcttccagaagacgagagaagatcatatttgaaagaactacggcgg
cccgggttggataatctaaggcgcatgcagataaataagcgcattaacgtcaggtgccgg
aagacgccggtatgctattattgcaatgctatcaacggaactgtcaagaaagcgagtacc
ggagctttaaagatcgttcacgacaagtttagggccttcaacgcttccctctcggctaag
aaaatacctcctcccagcaagcttgcctttgatcggtcctttgaggaagcaaaaaagtcc
aacccggatatcgagaagcattacagacgtgttttcgatgacctaaatcctcttcgggtg
ctgaagctgtttcgtcggatttccaatgaagattgcgaattgcttagtttgaatgtggac
ggagctcggccggaatatttcctttggcagtttattcctgctcccccggttcctattcgg
ccatccgttggccaagagggacctagtacggaagacgacctgactgcaaaactgggagac
attgtccagagcaatctgaatttgaaaatggctctagataaaggggcacccgtccagacc
atcatcgaatgctgggactacatgcaactccagattgcagtgtacatcaacagtgatatc
cctggtttacagaacacggattccaaaaagaccattcgagggttgtgccaaaggttaaaa
ggcaagcaggggcgattcagaggaaacttgtcgggaaagcgtgttgatttttctggacga
actgtcatctcaccagaccctaatttgcgcatagacgaagttgccgttcctcagctggtt
gccatgaacatgacctatccagagcgagtaacaagatataacaaagaaaagctacgtcag
cgtatacggaatggcacaaaaacttggcctggggcaaactatctcataaaagaaggcaac
tcattcaggctctttctaaagtatggcaacctgaacatgatagcaaaccagctccgggaa
ggtgatatagttgagcggcatttagaaaatggggatattgttctgttcaatcgtcagcca
tcccttcacaaactgagtatcctttcacattttgtcaaagtccggcctcataggacgttc
cggttgaatgagtgtgtttgcaacccgtacaacgccgatttcgacggtgatgaaatgaac
ttgcatgttccgcaaactgaagaagcaagggccgaagctatggaacttatgggagttaaa
agcaatctggccacacccaagaacggagagccgatcattgctgctatccaggatttcatt
actgctgcctatctactcagtagtaaggataatttctttgatagaaaaacttttactcaa
atatgtctatccatgctcgactccagcacccgattcgagctcccaccgccagcaactatt
aagccgcaaatgctctggaccggcaagcaggtgttcagcgttctcatgagaccaaacaaa
gactgccccgtcaaagtcaaccttgatgcggcatgtcgtcaactcaagctcgtcaagggt
cagccgagagatctatgtgagaatgacggatggctgtgtatccgcaattcagaaatgttg
tgtggtgttgcagacaaatcaacaatcggagctggaaagaaggataatatcttcttcgtc
atccaaagagattttgggtacgcagccgcagcagaagccatgaacaggttgtcgaaactc
tctgccagatggttgacaaataagggcttctcaattgggatcactgatgtatatccagga
gaaagcctagtcaagctaaaagataccttgataaacactgcttttcagcaatgtgatgat
ctaatcgcagctgctagtaaagagaaacctcagatgggtaaatcggatagccgccaaacg
gcagagaacgaaatcaccggtatccttaacaaggttcgtcagcaagctggtgaatactgt
atttcagaagtaagcaagcacaacgcaccccttattatggcaacatgcggctccaaggga
tccaatatcaacgtgtctcagatggtagctgtcgtcggacaacaatccattgagaatgct
cgtgtctccaaaggtttccaggaccgtaccctaccacattttgctcgccattcccagcat
gctcttgcaaagggttttgtgcgaaatagtttcttttctggacttactcctaccgaattt
cttttccacgctatgtctggtcgtgagggtttgattgataccgccgttaagactgcagag
acaggctatatgtctcgaagacttatgaaatctctcgaggatctatctactcgatacgac
aatactgtccgagattcgtcttcattcatcatccagtttcagtatggagatgatcagttg
gaccctgtcaatatggaggcttcagctaaacccgttcacttcgaccgcacctttacacat
gcagagagtactacatacgacaaagatgagaagggcttatctgcagatgaaatattggcc
ttatgtgaagaacttatagctccagagcgaaagaaattggttcggtacgatctgctcgga
aacacgctctcctataaagctgaaaatgacttcgctaccgaccagtgggaaagcaaccgt
gacttcttaagttcgattgaagagtatgtagcagcaaaggctgcacaacttagacctagc
gataacgaagaaggcaaagagcagatggcgtttacgcatactagcaaaatttccgctaga
acgctcaaggctttcatcacttcgtgtttggataagtatatgcgtgcacatgtcgagccc
ggccacagtataggagccatcggtgcacaatccattggggaacctggaacacaaatgaca
ctgaaaactttccatttcgctggtgttgctggtatgagtattacccaaggtgttccgcgt
atcaaggaaattatcaacgcatcaaaagagatcagtacgccgatcatcacttgcgagctt
gtgaacaagacggacatgcgtattgctgagatcgtcaaaggccgagttgagaaacttttc
ctcaaggatattgtctactatatcgaagaaaaccgctctcagacatcctcttttatcaat
atcaaggttgacttctcaacgatcaagaagttgcagcttgagttgacactacggcaaatc
ttacttgccattaagaagcacaaagcgttcaaagccgctgacctgacgttccggtcattc
aactcgcatatccacatctacgtggatgaaggtgcctcaatggcaggtgtttcggtctct
gagcaaaagatcaccggctcagatccatacattcgaatcaactatttgaggcgaattctg
ccgaacatccaagtgttcggctatccggactgcacccgagcagtgattcgtgtcggagaa
aaagttgccactaacattcttttggttgaaggatatggcctccgagcatgcatgacgact
gatggcattgagggccaccgtacccgcaccaaccacgtcatggagatgcgggacgttctt
ggtatcgaggcggcgcgaacgacgattatcgacgaaatcagctctgtcatgtcgggcatg
gcgattgatcctcggcatatgcaactccttgcagatgttatgacatataaaggcgaggtg
cttggaattacccgtttcgggctggctaagattcgcgactcagttcttcagctggcgagt
tttgagaagacggcggatcatctctttgatgcgggtggtgcgggcagacgcgacactgtc
caaggagtgtcggagtgtatcatcatgggcaagactatctcattgggcacaggtagtatg
gaagttgttcgagacctgaagcttcttgacagccatgtgggtaagaagaagacagtgttt
gatgacgcgtggagggacatatgtgaaccgaagcagagaagacgggctcttccccgtatg
gctatggcttgctag
DBGET
integrated database retrieval system