Trichophyton verrucosum: TRV_05220
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Entry
TRV_05220 CDS
T01615
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
tve
Trichophyton verrucosum
Pathway
tve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRV_05220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tve03400
]
TRV_05220
DNA repair and recombination proteins [BR:
tve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRV_05220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_23
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
9577393
NCBI-ProteinID:
XP_003020694
UniProt:
D4DDK9
LinkDB
All DBs
AA seq
1217 aa
AA seq
DB search
MGSSAQTTPAPSRVLKRSTPSTQNMNKTQKSILGFFQPKSSPSAPSTSQRSSTLPASSPS
GASPLSETTTSSVRAKFSKQRLDDDQNITPVPSSDAIEPPEEDTPTAVRKTSAGNHEFST
SNTSSRRARTAVKSYEESEDEDVVQPGRRNARGRSQKRRRPGDLSSDEECFKPDEDDDED
KYIDDTDDFVVPDDESEEELKSSRKRKRPSKAPSKKESSSPPPIPGDDMDLEIPQCTSAS
TQKWRYDPDNVEPYQPRKTLVKPETHSSSKQKKAHMTEPENRYPWLANIMDMDKNPLGHP
DYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDL
KLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQ
KEDKVIKRELACVLTTGTLVEGSMIQGDMSTYCVAIKEAIIDGLPAFGISFVDTATGQFF
LSQFVDDVDMTRFETFVAQTRPQELLLEKSAMSTKALRILKNNTGPTTLWNYLKPGKEFW
EADVTVRELDAGSYFVSEDKNHASAWPQALQDARDKDLVMSAFGALLQYLEMLKTGRDLI
TIGNFTWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQ
WVCHPLMDIKKINARLDAVESLNADSTVREQFSSQLTKMPDLERLISRVHAGTCKAQDFV
RVLEGFEQIEYTMGLLKEAGSGHGLIGQLISAMPDLNGLLKFWETAFDRSKARESDILVP
EEGIEEEFDASKKNIEQLEDELEQVLQRTRRELKCSTIVFKDNGKEIYQLEVPIKIKNIP
KSWDQMSATKQVKRYYFPELRALIRKLQEARETHAQVVKGVAGRFYARFDKDYSSWLAAV
KIIAQLDCLIGLAKASTALGHPSCRPTFVDDERSVLDFQELRHPCMMPNVGDFIPNDVKL
GGDTSNINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDN
IFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGAL
GFFATHYHSLAAEFEGHPEIAARRMRIHVDDAERRVTFLYKLEDGVAEGSFGMHCASMCG
IPSKVVEGAEVAAKQWEHTSRMKESLEKRKGGGLIGLGWWSDVSWILKESAQATDEATRS
KNGDRGVEILLKAIEAL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgggatcatccgcccaaacgacgcctgctccctctcgcgtcctcaagcggtcaacacca
agtacacagaacatgaacaagacccaaaaatccatcttgggattcttccagcctaaatcg
tctccttcggctccatcaacctcccagcgaagttccactctcccagcatcttctccgtct
ggagccagtccactcagcgaaacaaccaccagctcggtgagagccaaattttcgaagcag
aggctagatgatgatcaaaatattactccagttccgagtagtgatgcaattgaacctccc
gaagaagacacgccgaccgctgtgaggaaaacatctgcagggaaccatgagttctctacc
tctaacacatccagcagacgggcgaggacggcggttaaaagttatgaagaatctgaggac
gaggatgttgtccagccggggagaagaaacgcacgggggcggtctcagaagcgaagaaga
cctggggatctcagtagtgacgaagaatgctttaagcccgatgaggatgatgacgaggat
aaatacatagatgatactgacgacttcgttgtcccagacgatgaatcagaagaagaattg
aagtcatctaggaaacgaaagcgtccttcaaaggcaccgtctaagaaagaatccagcagc
ccgccacctattcctggtgatgacatggacttggagatccctcagtgcacgtctgcttcc
acccaaaagtggcgctatgaccccgacaatgtagaaccataccagcctcgaaaaacccta
gtcaaaccagagacacactccagtagcaaacaaaaaaaggcccatatgacggagccagaa
aatcgatacccatggcttgctaatattatggatatggataaaaatccacttggtcatcct
gactatgatccccgtactttatacatcccacctctagcctggaccaaattttcgccattt
gaaaagcagtattgggagatcaaacagaaattctgggataccattgtatttttcaaaaag
gggaaattttacgagctatatgaaaatgatgccactataggtcaccaactttttgatctc
aaacttacggatagagtcaatatgcgtatggtcggagttcccgaaatgagccttgatcat
tgggccaaccaattcgttgcaaaaggattcaagattgctcgcgtggaccagtcggagtct
gcattaagcaaagaaatgagagaacgtgaagataaaggcaataagatgggcaaagcacag
aaggaagacaaggtcataaaacgagagctagcatgtgttctgaccactggaaccttagtg
gaagggtcaatgattcagggcgatatgtccacatactgcgtggcaatcaaagaggctatt
attgatggcttaccagcctttggtatatcgtttgtcgatacagctaccggacagtttttc
ttatctcagttcgttgacgatgtggatatgacaaggttcgagacctttgttgcccagacc
agacctcaggaattgttacttgaaaaatctgctatgtctaccaaagccctcagaatattg
aagaacaataccggcccaactactctctggaattacctgaagcctgggaaggaattctgg
gaggctgatgtcaccgttcgggaacttgacgcaggtagctatttcgtttcggaagacaaa
aaccatgcatccgcctggccgcaagcattgcaagacgctcgagataaagatttggtcatg
tctgcttttggggctcttttacagtaccttgaaatgctaaaaactggacgagacctcatc
accataggaaatttcacttggtacgatccaattaagaaagcatccagtctcgtactggac
gggcagaccctaatcaaccttgaaatattcgcaaacacatacgatggcagctcggaagga
acactgtttcaactactcaaccgctgtgttacgccgtttgggaagcggttgtttaaacaa
tgggtttgccatcccctgatggatatcaagaagatcaatgcccggcttgacgctgttgag
tccctgaatgcagatagcacagtgcgtgagcaattctcgtcacagttgaccaaaatgccg
gatcttgaacggcttatatctcgagtgcacgctggtacatgcaaagcccaagacttcgta
cgtgtacttgagggatttgaacaaatcgagtatacaatgggtcttctgaaggaagctggg
tctggtcatgggttaatcggccaattgatctctgccatgccggatctcaacggtctcttg
aaattctgggagacggcatttgaccgctctaaggctagagaaagtgatatcttagtccca
gaggaaggcattgaggaagagtttgacgcatccaaaaagaatattgaacaattggaggat
gaattagagcaggtactacaacggaccaggagggagttaaaatgttcaaccattgttttc
aaggataatggcaaagaaatttaccaactcgaggttcccattaagatcaagaacatacca
aaatcctgggaccaaatgtccgccacgaagcaggttaagcgatattacttccctgagcta
agagcattgattcgaaaactacaggaagctcgcgagacacatgctcaggttgtgaagggt
gttgctggcagattttatgctcgatttgacaaagattactcgagctggcttgcagctgta
aagataatcgcccagcttgattgtctgattggattagccaaagcttccactgcactagga
catccgagttgtcgtcctacgtttgtcgatgatgagcgcagtgtacttgatttccaagaa
ctccgccacccctgtatgatgcccaatgttggagacttcattcctaatgatgtcaaactg
ggaggggatacatcaaatattaaccttctgactggcgcaaacgcagcaggaaagtctaca
gttttgagaatgacttgcacggcggttatcatggcacaaataggttgctatgtcccttgt
gaatatgcccgcctaactccggttgatcgcattatgtccaggcttggggctaatgacaac
atatttgctgctcaatccaccttctttgtcgagctttcagagaccaagaaaattctctct
gaagcaactccccgttccttggtaatattggatgaactaggccgtggaactagctcttat
gacggtgttgccgtggcacaagcagtacttcaccatgttgctactcatataggcgctcta
ggtttctttgctactcattatcactcactcgcagctgaatttgagggacaccctgaaatt
gctgctcgcagaatgcggattcatgtcgacgatgctgaaagacgtgtgactttcctctac
aaactcgaagatggggtcgccgaaggcagttttggaatgcactgtgcctcaatgtgcggc
atcccatccaaggtggttgaaggtgcagaagtcgctgcgaagcagtgggaacacacaagt
cggatgaaggagagtctagagaaacgaaaaggtggtggactgattggcctgggctggtgg
agtgatgtttcctggatcttaaaggagtctgcgcaggcaactgatgaggctactcggtca
aaaaatggtgaccgtggagttgagatactcctcaaggccattgaagcgttataa
DBGET
integrated database retrieval system
