Trinickia violacea: FAZ95_20040
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Entry
FAZ95_20040 CDS
T09503
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
tvl
Trinickia violacea
Pathway
tvl00860
Porphyrin metabolism
tvl01100
Metabolic pathways
tvl01110
Biosynthesis of secondary metabolites
tvl01120
Microbial metabolism in diverse environments
tvl01240
Biosynthesis of cofactors
Module
tvl_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
FAZ95_20040 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvl04147
]
FAZ95_20040 (hemB)
Enzymes [BR:
tvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
FAZ95_20040 (hemB)
Exosome [BR:
tvl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FAZ95_20040 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QCP51243
UniProt:
A0A4P8IV09
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All DBs
Position
1:4383521..4384513
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AA seq
330 aa
AA seq
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MSFYPHHRPRRMRRDDFSRRLMRENLLTTNDLIYPVFITEGTNARQAVPSMPGVERVSVD
LLMGVAEQCVELGVPVLSLFPAIEPSLKTPDGREAANPEGLIPRAVRELKKRFPELGVLT
DVALDPYTSHGQDGVLDEAGYVLNDETVEILVDQARAQAEAGVDIVAPSDMMDGRIGAIR
EMLESEGHIYTKIMAYAAKYASAFYGPFRDAVGSATNLGKSNKMTYQMDPANSDEALREV
RLDIEEGADMVMVKPGMPYLDIVRRVKDEFRFPTYVYQVSGEYAMLKAAAQNGWLDHDKV
VMESLLAFKRAGADGVLTYFALDAARLLRA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctatccgcatcaccgcccccgccgcatgcgccgcgacgacttttcgcgccgc
ctgatgcgcgagaacctgctgactacgaacgatctgatttatccggtattcatcaccgag
ggcacgaacgcacggcaagccgtgccgtcgatgccgggtgtcgagcgtgtgtcggtcgac
ctgctgatgggcgtcgccgaacaatgcgtcgagctcggcgtgccggtgctgtcgctcttt
ccggcgattgagccgtcgctcaagacgcccgatggccgcgaagcggccaacccggaaggc
ttgattccgcgcgctgttcgcgagctcaaaaagcgctttccggaactgggtgtgctgacc
gacgtcgcgctcgacccctacacgagccacggccaagacggtgtgctcgacgaagccggc
tacgtgctcaatgacgaaacggtcgaaatcctcgttgatcaggcgcgcgcgcaggccgag
gccggcgtcgatatcgtcgcgccgtcggacatgatggacggccgtatcggcgccattcga
gagatgctcgaaagcgaaggccacatctacacgaagatcatggcttacgcagcgaagtac
gcgtcggcgttctacgggccgttccgcgatgccgtcggttccgcaacgaacctcggcaag
agcaacaagatgacctatcagatggacccggccaattccgacgaagccctgcgcgaggta
cgcctggatatcgaggaaggcgcggacatggtgatggtcaagccgggcatgccgtacctc
gacatcgtgcgacgcgtgaaggacgaattccgcttcccgacctatgtctatcaggtcagc
ggcgagtacgcgatgctcaaagccgccgcacaaaacggctggctcgatcacgataaggtg
gtgatggagtcgctgctagcgttcaagcgtgctggtgcggatggcgtgctgacgtatttc
gcactcgacgcagcgcgactgctgcgcgcataa
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