Trinickia violacea: FAZ95_30255
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Entry
FAZ95_30255 CDS
T09503
Name
(GenBank) sarcosine oxidase subunit alpha family protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
tvl
Trinickia violacea
Pathway
tvl00260
Glycine, serine and threonine metabolism
tvl01100
Metabolic pathways
Module
tvl_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FAZ95_30255
Enzymes [BR:
tvl01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
FAZ95_30255
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
FAZ95_30255
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
HI0933_like
GIDA
FAD_binding_3
Pyr_redox
DAO
Thi4
AlaDh_PNT_C
NAD_binding_7
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QCP53345
UniProt:
A0A4P8IZ91
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All DBs
Position
2:1805940..1808951
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AA seq
1003 aa
AA seq
DB search
MSQKDRLGSGGRINRAIPLTFTFNGRTYQGYQGDTLASALLANGVHFVARSWKYHRPRGI
VTAGVEEPNAVVQLERGAYTVPNARATEIELYQGLVATSVNAEPSIEHDRMAVNQKIARF
IPAGFYYKTFMWPRKWWPKYEEKIREAAGLGKAPDTLDADRYDRCYAHCDVLVVGGGPAG
LAAAHAAGAAGARVILVDDQRELGGSLLSCKAEIDGKPGLQWVEKIEAALSQMPDVKILS
RSTAFGYQDHNLVTVVQRLTDHLPVSMRKGTRELMWKVRAKRVILATGAHERPLVFGNND
LPGVMLASAVSTYVHRFGVLPGREAVVFTNNDDGYQCALDLKACGAAVTVVDPRPQGSGT
LPNAARRQGVKVLNGAVVTEARGKLRVASAEVASFAGGKVGAKQTSLPCDLLAMSGGWSP
VLHLFAQSGGKAHWNDQKACFVPGKAMQAECSVGAAAGEFSLARGLRFAVDAGVEAAKAV
GCKSERPVAPRAAEINEKPLLPLWLVGSREAAPRGPKQFVDFQNDVSAADILLAAREGFE
SVEHVKRYTAMGFGTDQGKLGNINGMAILAEALGKTIPETGTTTFRPNYTPVSFGAFAGR
EVGDFLDPIRKTCIHEWHAEHGAMFEDVGNWKRPWYYPKNGEDLHAAVARECLAVRNGVG
ILDASTLGKIDIQGPDAAQLLNWVYTNPWSKLEVGKCRYGLMLDENGMVFDDGVTVRLAD
QHYLMTTTTGGAARVLTWLERWLQTEWPNLRVRLGSVTDHWATFAVVGPKSRKVLQKVCG
DIDFANEAFPFMTYREGTVAGVAARVMRISFSGELAYEVNVPANVGRTVWEALMAAGDEF
GITPYGTETMHVLRAEKGYIIVGQDTDGSITPFDLGMGGLVAKSKDFLGRRSLTRSDTAK
EGRKQLVGLLTDDASFVLPEGGQIVAKPLVNHQFGDLAPMIGHVTSSYYSPILKRSIALA
VVKGGLGKMGETVTIPLANGKQVAAKISSPVFYDTEGVRQHVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaaagaccgcctcggttccggtggccggatcaatcgcgcgatcccgctcacg
tttacgttcaacggcaggacctatcagggctatcagggagatacgctcgcgtcggcgctg
ctcgccaatggcgtgcacttcgtcgcgcgcagttggaaatatcaccggccgcgcggcatc
gtgaccgcaggtgtcgaagagccgaatgccgtcgtgcagctcgagcgcggcgcgtacacg
gtgccgaatgcgcgcgcgaccgaaatcgagctctatcaggggctcgtcgcgacgagcgtc
aatgccgagccgtcgatcgagcacgaccgcatggccgtcaatcagaagatcgcgcgcttc
attccggcgggcttctactacaagacgttcatgtggccgcgcaaatggtggccgaagtac
gaagagaagatccgcgaagccgcgggcttgggcaaggcgcccgatacgctcgacgcggac
cgctacgacaggtgctacgcgcattgcgacgtgctcgtcgtcggcggcgggccggcggga
ctggccgctgcgcatgcggcgggcgcggcgggtgcgcgcgtgatcttggtcgacgatcag
cgcgaactgggcggcagcctcttgtcgtgcaaagcggagatcgacggcaagccgggcctg
caatgggtcgagaagatcgaagcggcgctctcgcagatgcccgatgtgaagatcctctcg
cgcagcacggcgttcggttatcaggaccacaacctcgtcaccgtcgtgcagcgcttgacc
gatcacctgccggtgtcgatgcgcaagggcacgcgcgagctgatgtggaaagtgcgcgca
aagcgtgtgattctcgcgaccggcgcgcatgagcgtccgctcgtgttcggtaacaacgac
ctgccgggcgtcatgctggcgtcggcggtgtcgacgtatgtgcatcgcttcggcgtgctg
ccggggcgcgaagcggtcgtgttcacgaacaacgacgacggctatcaatgcgcgctcgat
ctcaaggcgtgcggggcggcggtgaccgttgtcgatccgcggccgcagggcagcggcacc
ttgccgaacgcggcacgcagacaaggcgtgaaggtgttgaacggcgcggtggtgaccgag
gcgcgcggcaagctgcgcgtggcgtcggcagaagtggcatcgtttgcgggcggcaaggtc
ggcgccaagcaaacgagcctgccgtgcgatctgcttgcgatgtcgggcggctggagccct
gtgttgcacctgttcgcgcaatcgggcggcaaggcgcattggaacgatcagaaagcgtgc
ttcgtacccggcaaagcgatgcaggcggagtgcagcgtcggcgcggcggcgggcgagttc
agtctcgcgcgcggcttgcgcttcgcagtcgatgcgggcgtcgaggcggcgaaggcggtc
ggctgcaagtccgagcgtccggtggcgccgcgcgccgccgagatcaacgagaagccgttg
ctgccgctgtggctcgtcggcagccgcgaggccgcgccgcgcgggccgaagcagttcgtc
gacttccagaacgatgtgtcggcggccgacattctgctcgccgcgcgcgaaggcttcgaa
tcggtcgagcacgtcaagcgctacacggcgatgggcttcggtaccgatcaaggcaagctc
ggcaacatcaacggcatggcgattctcgcggaggcgctcggcaagacgattcccgaaacc
ggcacgacgacgttccgcccgaactacacgcccgtttcgttcggcgcgttcgcgggacgt
gaagtcggcgacttcctcgatccgatccgcaagacctgcatccacgaatggcacgccgag
cacggcgcgatgttcgaggacgtcggcaactggaagcggccttggtactacccgaaaaac
ggcgaggacctgcacgcggcggtggcgcgcgaatgtctggcggtgcgcaacggcgttggc
attctcgatgcgtcgacgctcggcaagatcgacatccagggccccgacgccgcgcaactg
ctgaactgggtctacacgaacccgtggagcaagctcgaagtcggcaagtgccgctatggg
ctcatgctcgacgaaaacggcatggtgttcgacgacggcgtgacggtgcgcctggccgat
cagcactacctgatgacgacgaccacgggcggcgcggcacgcgtgctcacatggctcgaa
cgctggctgcagactgagtggccgaacctgagagtgcgtctcgggtcggtgaccgaccat
tgggcgacgttcgcggtggtcggaccgaagagccgcaaggtgctgcagaaagtgtgcggc
gatatcgacttcgcgaacgaggcattcccgttcatgacgtatcgcgaagggaccgtcgcc
ggcgtcgcggcgcgcgtgatgcgcatcagcttctcgggcgagctggcctacgaggtcaac
gtgcccgcgaacgtcggccgcaccgtgtgggaagcgctgatggcggcgggcgacgagttc
ggcatcacgccctacggcacggaaacgatgcacgtgctgcgcgcggagaagggctacatc
atcgtcggccaggacaccgacggttcgatcacgccgttcgatctcggcatgggcgggctc
gtcgcgaagtcgaaggacttcctcggcaggcgctcgctcacgcgctcggatacggcgaag
gaggggcgcaagcaactggtcggcctgctgaccgacgacgcttcgttcgtgttgccggaa
ggcggccagatcgtcgcgaagcctctcgtcaatcaccagttcggcgatctcgcgccgatg
atcggccacgtcacgtcgagctactacagcccgatcctcaagcgctcgatcgcgctggcc
gtggtgaagggcggcttgggcaagatgggcgagacggtcacgattccgctcgcgaacggt
aagcaggtcgccgcgaaaatttcgagcccggttttctacgacaccgaaggagtgcgtcaa
catgtggaatga
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integrated database retrieval system
