Thermoplasma volcanium: TVG1411343
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Entry
TVG1411343 CDS
T00042
Symbol
TVG1411343
Name
(GenBank) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tvo
Thermoplasma volcanium
Brite
KEGG Orthology (KO) [BR:
tvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvo03016
]
TVG1411343 (TVG1411343)
Enzymes [BR:
tvo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
TVG1411343 (TVG1411343)
Transfer RNA biogenesis [BR:
tvo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
TVG1411343 (TVG1411343)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAB60504
UniProt:
Q978Q3
LinkDB
All DBs
Position
1410138..1411343
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AA seq
401 aa
AA seq
DB search
MKIYFEAYGCTLNQGETALYVNKLLNEGNTLVSNPKEADLSIIGTCAVIKKTEDHMMARI
QNLSRFGKVEVIGCLAPVKGKTMVEDNVSVIEKDRFRSFQEVIDEVSPVNAEIVSGIPIN
QGCTGKCNFCVSHIARGKLVSRKPEKIAGQIKILLQRGIKEIKITSLDTAAYGKDIGLRL
PHLIRTITEIGDDFRLRVGMMEPKNTLEIVDDLISAYRSEKVFKFLHLPVQSGDDYVLEV
MNREYTVSDFIRITGKFREAFPDSTLSTDLIIGYYAENDDSFEKTVQLIEKIRPEIINVT
KFSPRELTADFEKRPKPTNILKEQDRMIADMHKEILQEKFSNLIGKTEFVLITENGKGRS
MIGRDHAYRPIVIMDKTRKFEFHQVEITGFENTSLIGRIID
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatactttgaagcctacggctgcactttgaaccagggtgagaccgcactctac
gtgaataaactcctaaacgaaggaaatacgcttgtatcgaatccaaaagaagcggatcta
tctataataggcacctgcgctgtcataaaaaagacggaagatcatatgatggcaaggata
cagaatctttctaggttcgggaaagttgaagttatagggtgcttagctcctgttaaggga
aaaaccatggtggaagataatgtcagcgtaatagagaaggatagattccgaagctttcaa
gaggtcatagatgaagtaagccctgtaaatgcagagatcgtttcaggcataccaattaat
cagggatgtactggaaaatgcaatttctgcgtatcccatatagctagaggaaaacttgtt
tcaagaaagcctgaaaagatcgctggacagataaaaatactccttcagcgcggaatcaag
gaaataaagataacatctctagatacagcagcttatggcaaggatatagggcttcgcctg
cctcatctgataagaacgataacagaaatcggggatgactttaggctaagggtaggaatg
atggaacccaagaacaccttagaaattgttgacgatctcataagtgcatacagaagcgag
aaggttttcaagttccttcatcttcccgtgcagagcggagacgattatgtcctagaagtt
atgaaccgggaatatactgtatcagattttattagaataacaggcaaatttagggaggct
ttcccagattcgaccctttctactgatttaataatagggtactacgcagaaaatgatgat
agtttcgagaaaactgtccaattaatagaaaaaataaggccagaaattattaacgtcact
aagttctctccgagggaactgacagctgacttcgaaaagaggccaaagcccactaatata
ctaaaagagcaggacagaatgatagcggacatgcataaggagatactacaagaaaaattt
tccaatcttataggaaagacagaatttgtattgattacggaaaacggtaaagggcgatca
atgatagggcgggaccatgcctacaggccaatagttataatggacaaaacaaggaaattt
gaatttcatcaggttgaaataactggatttgaaaatacttcacttatcggcaggatcatc
gactga
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