Tripterygium wilfordii (thunder duke vine): 119981147
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Entry
119981147 CDS
T07256
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119981147
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
119981147
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119981147
03036 Chromosome and associated proteins [BR:
twl03036
]
119981147
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
119981147
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
119981147
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
119981147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
Htt_N-HEAT_1
PDS5
Adaptin_N
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
119981147
NCBI-ProteinID:
XP_038680115
LinkDB
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Position
16:3413121..3420890
Genome browser
AA seq
587 aa
AA seq
DB search
MAMMDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGAQMREQ
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSASETLKTELRTIYGQLCQDDMPMVR
RSAATSLGKFAASVEPAHLKTDIMSLFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTILHAISLLAPVMGVEITCSQLLPVVVNASKDRVPNIKFNVAKVLQS
LIPIVDNSVVENTIRPCLIELSEDPDVDVRFFATQALQSSDQVMMSR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggacgagccgctgtatccaattgcggttttgattgacgagctcaagaac
gacgacattcagctgcgtttgaattccattcgccgtctctccacgatcgcacgcgcgcta
ggggaagagaggacgcggaaggaactgattccgttcttgagtgagaacaatgacgatgat
gacgaggtgcttcttgcaatggctgaggaattgggggtcttcattccctatgttggcggt
gtggagcacgccaatgttttgttgcctccactggagactttgtgcacggttgaggagaca
tgcgtgagggacaaagcggtggagtcgttgtgtagaattggggcgcagatgagggaacag
gacttggttgagtatttcattccactggtgaagaggctggctgcgggtgagtggtttact
gctcgagtttcctcatgtggcttgtttcacattgcttacccaagtgcttcggagacatta
aaaactgaactaaggacaatatacggtcagctctgtcaagatgacatgccaatggttagg
agatcggctgcaacaagcctgggaaaatttgctgcttcagttgaacctgcgcatttgaaa
actgatatcatgtccttatttgatgacctgacacaagatgatcaagattctgttcgctta
ttggctgttgagggttgtgcggctcttgggaagttgttggagccccaagactgtgtggct
catattcttcctgtcatagttaatttctcacaggataagtcttggcgggttcgttacatg
gtagcaaatcaattatatgagctatgtgaagctgttggtcctgagcctacaaggtcagac
ctagttccagcatatgttcgcctacttcgtgacaatgaagctgaagtacgaatagctgcc
gccggaaaagtaactaaattttgccggatattgaacccagaacttgcaatccagcatatt
cttccctgtgtgaaggaattgtctactgattcctctcaacatgttcgttctgctttggct
tccgttataatgggaatggcaccagttctggggaaggatgcaacaattgagcaactgctc
cctatttttctttctcttctgaaagatgaatttcctgatgttcgtctaaatattatcagc
aagcttgatcaagtcaaccaggtaattggaattgacctgctgtcccaatctctactgcca
gcaattgttgagcttgcagaggatagacactggagagttcggcttgcaataatagaatac
atacccttgttggcaagtcagttaggtgtgggattctttgatgataagcttggtgctctt
tgcatgcaatggctaaaagataaggtttactcgattcgtgatgctgctgctaacaatgtc
aagcgccttgcagaagaatttggccctgattgggcaatgcagcacattgttcctcaggtt
ctggacatgattaacaacccacattatctctaccggatgaccattctacatgcaatttct
cttcttgcccctgttatgggtgtggaaatcacgtgctcccaacttcttcctgtggtggtc
aatgcttcaaaagatagggtaccaaacatcaagttcaatgtggctaaggtgttgcagtcc
ctcattcccatagtggataattccgtggtggaaaataccattcgtccctgtttgattgag
ctgagtgaagacccagatgtggatgtccgattttttgcaacccaggcattacaatcaagt
gatcaggtcatgatgtctagatag
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