Tripterygium wilfordii (thunder duke vine): 119981365
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Entry
119981365 CDS
T07256
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119981365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119981365
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119981365
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119981365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
119981365
NCBI-ProteinID:
XP_038680382
LinkDB
All DBs
Position
16:complement(695983..709653)
Genome browser
AA seq
1181 aa
AA seq
DB search
METKEEQMVVGRRSAESPDYGPLRELVRHHIESYDHMVQFGLDTMFESIKPVEVKDPSTD
ITLRIWLSKPMLYSPVKEGTVKNMNTPLLPFECRQAKISYAGKFTADVCFQYGGAGAAVI
RENFNLGHFPVMLMSMLCHLKSADPKILVSCKEEPTEMGGYFILNGLERVFRLVILPKRN
YPMSMVRSSFSERREGYTDKAVVIRCVREDMSAVTVKLYYLRNGSARLGFWIRNREYMLP
VGIVLKALVDTSDREIYENLTCFYDEKYEKVKGAVGTPLVGERAKIILDELRDLSLFTRT
QCRHHIGQHFREVMIGLEKKSFSDVADAVLKDYIFVHLNNNDDKFNLLIFMVQKLFSLID
QTSVPDNSDSLQNQEALLPGHLITIYLKEKLEEWLQKAKKLLEDEISDKSPKKAFDLCSL
AHVKKVIDKNPLKQIGPAIEAMLRSGGLATQSGLDLQQRAGFTVQAERLNFLRFISFFRS
VHRGTSFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSHIDSKRGNR
DFFKIRASILNVLVGIGMTSSLPKLVKAGPPQILHVLLDGRVVGVIPSSEAEKVVSHLRK
LKVLASSVIPDDLEVGYVPLSLGGAYPGLYLFTNPSRFVRPVKNLSIPSNESQNIELIGP
FEQVFMEIRCPDGGDGGRKNAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMA
KQTMAFSSVALQFRADQKLYHLQTPQSPIVRTSSYTKYSMDEHPSGTNAIVAVLAYTGYD
MEDAMILNKSSVDRGMCHGEIYQTETIDLCDGKSKSDRIFRRSNIDKSVLPLIDADGLPY
VGQIIHPNEPYCSIYNETTSTTKTNNRKGSESVIVDYVAVDTKNKKDIQKVNIRFRHPRN
PVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAA
KGGSLHGRFMDATPFASSVKERANERDTTSESKSLVDELGELLREKGFNYHGSEVLYSGV
YGIELTCEIFIGPVYYQRLRHMVSDKYQVRSTGRVDHATRQPIKGRKHGGGIRFGEMERD
AMLAHGAAYLLHDRLHTCSDYHVADLCSLCGSILTTVYNQSQKRPVRQIGGLPPGRAPKK
VTCNACQTNKGMETVAMPYVFRYLAAELAAMNIKMTLQLKE
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaggaagaacagatggtggtggggagaagatcagcggagtcgccggactac
gggccattgcgtgagctggtgaggcaccacatagagtcatacgatcacatggtgcagttt
ggattggataccatgttcgagtccatcaagcctgtcgaagtaaaagatccctccaccgat
attacgcttagaatctggttgagtaagcctatgctatacagtcctgtaaaggaaggtaca
gtgaagaacatgaacacgcctctgcttcctttcgaatgtcgacaggcgaaaatttcatat
gctggaaaattcactgcagatgtttgcttccagtatggtggtgctggtgctgctgttatc
cgggaaaattttaatcttgggcattttcctgtaatgttaatgtctatgctttgtcacttg
aaaagtgctgatccaaagatattggtttcgtgcaaggaagaaccgacagaaatgggtggt
tacttcattttgaatgggcttgagagagttttccgacttgtgatcttgccgaagcggaat
tatccaatgagtatggtgaggagttcattttctgaacggcgggaaggatacactgataaa
gcagttgttataaggtgtgtaagagaggatatgtctgcagtaacagttaaattatactat
cttcgcaatggaagcgcaagacttggattttggatacggaatagggagtacatgcttcct
gttggcattgttcttaaggctcttgttgacactagcgaccgtgagatttatgagaatttg
acatgcttctatgatgagaaatatgagaaggtaaagggcgctgttgggactcctcttgtg
ggtgagagagcaaaaattatccttgatgaacttcgagacttgtctcttttcactaggaca
caatgtcgacatcacattgggcagcactttcgagaagtcatgattgggctggagaagaaa
agtttttctgatgtggctgatgctgttctgaaggactacatatttgttcacctaaataac
aatgatgacaagttcaatctactcatctttatggttcagaaactcttttcacttatagat
cagacatctgtaccagacaattcggattccttacaaaatcaggaagccttacttcctggt
catctgattactatttatctcaaggagaaactagaagagtggctacaaaaagcaaaaaag
ctccttgaggatgaaattagtgacaaaagcccaaaaaaagcttttgacctctgcagctta
gcacatgtcaaaaaggtcattgataaaaatcctctgaagcaaattggtccagctattgag
gccatgctacggtctggaggattagctacacaatcaggcctggatttacagcagagagcg
ggcttcacagtccaggcggagcggcttaattttctgcgatttatttcattttttcgatct
gttcatcgaggaacttcttttgctggacttcggacaacaagtgttcggaaattgcttcct
gaatcttggggttttctttgtcctgtccacacacctgatggagagccatgtggattgttg
aatcatatgacctgcacttgtcgtattacatcacacattgattcgaaaaggggaaatagg
gacttttttaaaattagagcgtctattcttaatgtcctagttggcattggaatgacatct
tcattaccaaaacttgttaaagctggtcctcctcaaattctccatgttcttctagatggt
cgtgttgttggtgttataccctccagtgaagctgagaaagttgtctcccatttaaggaaa
ttgaaagtgttagcaagttcagtgattcctgatgatctggaagtgggatatgttcctctg
agcttgggtggtgcatatcctggtctgtatttgttcacaaatccttctagatttgttcgc
ccagttaaaaatttgtctatcccttccaatgaaagtcagaatattgaacttattggacca
tttgaacaggttttcatggaaataagatgtccggatggtggagatggaggaagaaagaat
gccttccctgcaactcatgaagaaattcatccaactggaatgctcagtgttgtcgctaat
ctcacaccttggtcggagcataatcagagcccacgtaacatgtaccagtgtcagatggca
aagcaaacaatggctttctcgtcagtagctcttcaatttcgtgctgatcaaaagttatat
catcttcagacgcctcaaagtcccattgtacgcacgagtagttatacaaagtacagcatg
gacgaacatccatcaggtacaaatgcaattgttgcggtgcttgcatatacaggatacgat
atggaggatgcaatgattctgaataagtcatctgttgatcgtgggatgtgtcacggtgaa
atatatcagacggagactattgatttatgtgatgggaaaagcaagtcagataggattttc
agaagaagtaacattgataagtcagttcttcccttgattgacgctgatggacttccgtat
gttggtcagataatacatccaaacgagccctattgtagcatttataatgaaacaacaagt
acaacaaaaaccaacaatcgaaaaggttctgaatctgttatagttgactatgttgcggtc
gatacaaagaacaagaaggatattcaaaaggttaatatacgatttcgacaccctaggaat
cctgttattggcgataagtttagcagtaggcatgggcagaagggtgtgtgctcccagttg
tggccagatattgatatgccattttctggagtcacaggaatgcgtccagatcttattatt
aatccgcatgcttttccttcaaggatgactattgcaatgcttttggaatctattgctgca
aagggaggcagcttacatggacggttcatggatgcaacaccatttgccagttcagtgaag
gagagagctaatgagagggatacgacatcagagtctaaatctctagtcgatgagctcggt
gaattgttgagggaaaaaggctttaattatcacggttctgaggtattatatagtggggtc
tatggaattgaacttacatgcgaaatttttattgggcctgtttattaccaacggctacgg
cacatggtttcagacaaatatcaggttcggtccaccggaagggttgaccatgccactcga
cagcctattaaaggaaggaagcatggtggaggtatccgctttggggaaatggaacgagat
gccatgcttgctcacggggcagcgtatttgttacatgacaggctgcatacatgttctgat
tatcatgttgctgatctgtgttcactatgtggaagcatcctcacaacagtgtacaaccag
tcacaaaagcgacctgtccgacagataggagggctacctcctggaagggctcccaagaag
gtcacttgcaacgcatgtcaaacaaataaaggaatggagactgttgccatgccttatgtt
tttcgatatttggctgccgaactggcagctatgaacataaagatgaccctccagttaaaa
gaatag
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