Tripterygium wilfordii (thunder duke vine): 120012682
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Entry
120012682 CDS
T07256
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120012682
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120012682
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
pAdhesive_6
Motif
Other DBs
NCBI-GeneID:
120012682
NCBI-ProteinID:
XP_038720045
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Position
13:16556720..16559405
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AA seq
479 aa
AA seq
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MNTFVGEAYDQIREICLRTELLCGVSGGVAVRWRPSCLSSGGSLSYGGGDSFSSDAVARV
FLYTVPAAKYIQITVYKYCRPAPDSAPEPVDDPELKSRPRGLVFDVTHHGAVDDGDSESS
SGFLAAWKAACDHGERATFYVPEGKYHVGPVEFSGPCKNNQSPKIVIRGNLIAPSKLQSF
PSKTWIQFSHLNRFSITGDLDKTNFDARGAVEAWKQHSCQHSSRCKTLIPSLKFDHVSHG
TIRNISLSNAKGFHLVIHESSNVNVHNVIVSSPEDSPNTDGIHVSHSSNINISSSTIGVG
DDCVSIIAGSVNVTVYDVTCNPGHGISIGSLGKTKNEEDVSGISVKKCKIKKTKNGIRIK
TWAGSTSSNAYNMTFDDIELTDVSNPIIIDQKYCPNHKCDTSKPSKVKIKDVTFKNVRGT
YKSDYAVSLLCSPSVPCENVKLVDINLTPTHEEDDEDWREGNLNLNGAIDGLQVINSNF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaacactttcgttggtgaagcctacgatcaaattcgcgaaatctgccttcggacggag
cttttgtgtggcgtctctgggggagttgcggtgcggtggcggccctcttgtttgagtagc
ggaggtagtctgagctacggtggtggggactcattcagttcagatgctgttgcacgagtg
tttttgtatacggttccagcggcaaaatacatacagatcacggtttacaaatactgcagg
cctgcaccagactctgctccagagccggttgacgatcctgaactaaagtcacgacctcga
gggcttgtctttgatgtcactcaccatggcgctgtagacgacggagattcagagagtagc
tcgggattcttggcagcatggaaggctgcttgtgatcatggtgagagagcaactttctat
gtaccggaaggtaaataccatgtcggtccggttgaattctccggcccttgcaagaacaat
cagtctccaaagatagtgattagagggaatctgatcgctcctagtaaactccaatcgttc
ccgtctaaaacttggattcaattcagtcacttgaacagattcagtataactggagacctt
gacaagaccaactttgatgcgcgaggagcggttgaagcctggaaacaacacagctgccaa
cattcttctcgttgcaaaaccttaatcccatcgttgaaattcgatcatgtttcacacggg
acgatcagaaatatttcattgtcgaatgccaaggggttccatctggtaattcatgagagc
agcaatgtcaatgttcacaatgttatcgttagttctcctgaagatagcccaaacacagat
ggaatccatgtcagtcactctagtaacatcaacatatcgtcttccacgattggagttggc
gatgattgtgtttccattatagctggttctgtcaatgtcactgtttacgatgtcacttgc
aatcctggccatggcataagtattggtagcttgggcaagaccaagaatgaggaggatgta
tcaggtatcagtgtcaagaagtgcaaaataaagaaaacaaagaatggtatcagaataaag
acttgggctggatctacttcaagcaatgcttacaacatgacgttcgacgacattgaattg
actgatgtctcgaaccccatcattatcgaccaaaaatactgtccgaaccacaaatgtgat
acatcaaagccttcaaaagtgaagattaaggatgttaccttcaagaatgtgaggggaaca
tacaaatccgactatgcagtgagtctgttgtgcagtcctagtgtgccttgcgagaatgtt
aagcttgttgatatcaatctgaccccaacacatgaagaagatgatgaagattggagggaa
ggcaatttgaatctaaacggtgcaattgatggcttacaagtgattaattcaaacttctga
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