Tripterygium wilfordii (thunder duke vine): 120012799
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Entry
120012799 CDS
T07256
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120012799
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
120012799
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120012799
03036 Chromosome and associated proteins [BR:
twl03036
]
120012799
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120012799
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120012799
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120012799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Adaptin_N
Htt_N-HEAT_1
PDS5
TAF6_C
RTP1_C1
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
120012799
NCBI-ProteinID:
XP_038720234
LinkDB
All DBs
Position
2:10953179..10959583
Genome browser
AA seq
587 aa
AA seq
DB search
MSMVDEPLYPVAVLIDELKNDDIQLRLNSIRKLSTIACALGEERTRKELIPFLSENNDDD
NEVLLAMAEELGVFIPYVGGVQHAHVLLPPLETLCIVEETCVRDKAVESLCRIGSHIREN
DLVDWFIPLVKRLAVGEWFTARVSACGLFHIAYPNAPEMVKTELRSIYGQLSQDDMPMVR
RSAASNLGKFAATVEPAHLKSKIMSIFDNLTQDDQDSVRLLAVEGCAALGKLLEPQECVA
YILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCQILSPNLAIQHILPSVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSFLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDKHWRVRLAIIEY
IPLLARQLGVGFFDDKLGSLCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEMVNNSHYLYRMIIIYAISLFAPVMGSEITCSKLLPAVVNASNDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIQPCLVELSEDPDVDVHFFANQALQSIDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgatgaaccactatatccagtagctgttctcatagatgagcttaaaaat
gatgacatccagcttcgattgaactcaatccgtaagctgtcaacaattgcttgtgctctt
ggtgaggagcggaccaggaaggaactcataccattcctaagtgaaaacaatgatgatgat
aatgaggtgcttcttgcaatggcggaagagttgggtgtgtttattccatatgtcggggga
gtgcaacatgcccatgttttacttcctcctctggaaaccctttgcattgttgaggaaacc
tgtgtgagagacaaagcagtggagtcattgtgcagaataggttctcacataagggagaat
gacttggttgactggtttattcctctggtcaagagattggcagttggtgaatggtttaca
gctcgagtttctgcatgtggtctatttcatattgcttacccaaatgccccggaaatggtg
aagacggaactgcgatcaatatatgggcagctgtctcaggatgacatgccaatggttagg
aggtctgctgcttctaatctgggaaagtttgctgcaacagttgaacctgctcatttgaag
tctaaaatcatgtcaatatttgacaatcttacccaggatgatcaagattctgtacggtta
ttggctgttgagggttgtgctgctcttggcaaattgttggaacctcaggagtgtgttgca
tatattctccctgttattgtcaatttctctcaggataagtcgtggcgtgtgcgttatatg
gttgcaaatcaattatatgagctttgtgaagctgtagggccagaacccacgaggacggac
ttggtccctgcatatgtgcggttacttcgtgataatgaggctgaagtacgtattgcagct
gcaggcaaagtaactaagttttgccagatcttaagtcccaatcttgccatccaacatatt
ctcccctccgtgaaggaattatcatcagattcttcccagcatgtgcgctctgctttggcc
tctgttataatgggaatggctcctgtgttagggaaggatgcaaccatcgagcaacttctt
ccaatttttctctcctttttgaaggatgaatttcccgatgtacgcctcaacattatcagc
aagcttgatcaagtgaatcaggttattggaattgatttgttgtcccaatcattgctacca
gccattgttgagcttgcagaggataaacattggagagttcgccttgcaattatcgaatat
attcctttgttggctagacagttgggtgtagggttttttgacgataaacttggttccctt
tgcatgcagtggctgcaggataaggtttactcgattcgagatgctgctgctaacaattta
aaacgccttgctgaagagtttggtccggagtgggcaatgcagcacataatccctcaggtg
ctggagatggtaaacaattcacattatttgtatcggatgatcattatatatgctatctct
ctctttgcccctgttatgggctcagaaattacatgttctaaattgttgccagcagtcgtc
aatgcatcaaatgacagagtacccaacattaaattcaatgtggcaaaggtgctgcagtcc
ctgattcccatagttgatcagtcggtggtggagaagacaattcaaccctgcttggttgag
ctcagcgaggatccagatgttgatgtccattttttcgccaaccaagcgctgcagtcgatt
gatcaggtcatgatgtctagctag
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