Tripterygium wilfordii (thunder duke vine): 120014104
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Entry
120014104 CDS
T07256
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020
RNA polymerase
twl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120014104
09124 Replication and repair
03420 Nucleotide excision repair
120014104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120014104
03019 Messenger RNA biogenesis [BR:
twl03019
]
120014104
03400 DNA repair and recombination proteins [BR:
twl03400
]
120014104
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
120014104
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120014104
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120014104
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Vg_Tdu
Motif
Other DBs
NCBI-GeneID:
120014104
NCBI-ProteinID:
XP_038721957
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All DBs
Position
2:6976968..6979855
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AA seq
177 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGRNLRENIVTKLMKDVEGTCSGRHGFVVAITGIEKVGQGLIR
DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
PGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTATV
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacatagtattggaacgaaacatgcaattgcaccctcgtcactttggccgt
aatctccgcgaaaacatcgtgaccaagctcatgaaagatgtagagggcacctgcagtgga
cgacatgggtttgtggtcgcaataactggtatagagaaagtcggacaaggattgattcgc
gatggaacagggtttgtgagttttcctgtgaagtaccagtgtgttgtcttcaggccattt
aaaggggagatattagaagctgttgttaccatggtgaacaagatgggattctttgctgaa
gctgggcctgtgcaaatttttgtttcaaaccatttgataccggatgacatggagttccag
ccaggagatacgcccaattatacaacttctgatggatctgttaaaattcagaaggacagt
gaagtacgtttaaagattattggcacccgagtagatgctacagaaattttctgcatcggt
accattaaggacgactttctgggtgtgataaatgatcctacagcgacagtttag
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