KEGG   Tripterygium wilfordii (thunder duke vine): 120014104
Entry
120014104         CDS       T07256                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020  RNA polymerase
twl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120014104
  09124 Replication and repair
   03420 Nucleotide excision repair
    120014104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:twl03021]
    120014104
   03019 Messenger RNA biogenesis [BR:twl03019]
    120014104
   03400 DNA repair and recombination proteins [BR:twl03400]
    120014104
Transcription machinery [BR:twl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120014104
Messenger RNA biogenesis [BR:twl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120014104
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120014104
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 120014104
NCBI-ProteinID: XP_038721957
LinkDB
Position
2:6976968..6979855
AA seq 177 aa
MFFHIVLERNMQLHPRHFGRNLRENIVTKLMKDVEGTCSGRHGFVVAITGIEKVGQGLIR
DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
PGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTATV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacatagtattggaacgaaacatgcaattgcaccctcgtcactttggccgt
aatctccgcgaaaacatcgtgaccaagctcatgaaagatgtagagggcacctgcagtgga
cgacatgggtttgtggtcgcaataactggtatagagaaagtcggacaaggattgattcgc
gatggaacagggtttgtgagttttcctgtgaagtaccagtgtgttgtcttcaggccattt
aaaggggagatattagaagctgttgttaccatggtgaacaagatgggattctttgctgaa
gctgggcctgtgcaaatttttgtttcaaaccatttgataccggatgacatggagttccag
ccaggagatacgcccaattatacaacttctgatggatctgttaaaattcagaaggacagt
gaagtacgtttaaagattattggcacccgagtagatgctacagaaattttctgcatcggt
accattaaggacgactttctgggtgtgataaatgatcctacagcgacagtttag

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