Thiothrix winogradskyi: L2Y54_02320
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Entry
L2Y54_02320 CDS
T08347
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
twn
Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twn03009
]
L2Y54_02320 (rimO)
Enzymes [BR:
twn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L2Y54_02320 (rimO)
Ribosome biogenesis [BR:
twn03009
]
Prokaryotic type
ribosomal protein modification factors
L2Y54_02320 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
UJS24890
LinkDB
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Position
complement(411668..412978)
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AA seq
436 aa
AA seq
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MKQAQPRVGFVSLGCPKALVDSERILTQLRAEGYEISGSYDDADLVVVNTCGFIDSAVEE
SLEAIGEALDENGKVIVTGCLGANAGTVLDAYPNVLAVTGPHAYEAVMQSVHQHLPPLHD
PYTHLIPPQGVRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPIGDVLQEAENLVN
AGVKELLVISQDTSAYGIDVKYRTGFWQGRPIKTHSQQLAEALGDMGVWVRLHYVYPYPH
VDNLLPLMAEGKILPYLDIPFQHASPTVLKNMRRPAHAEKVLERLGKWRATCPEIAVRST
FIVGFPGETEDDFETLLDFLEEAQLDRVGAFTYSPVKGADANAIDGAVPEEVKEERLERF
MELQAEISAAKLSRLIGKTMTVLVDEAGDGQSIARTHRDAPEIDGQVIIEGVELPVGEFV
QVHITHADEHDLWGKI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagctcagccccgtgtcggttttgtcagtctcggttgccccaaggcattggtg
gattccgaacgcattcttacccaattgcgtgccgaaggttacgaaatcagtggcagttac
gacgatgccgatctggtggtggtgaatacctgcggttttattgattctgcggtagaagag
tcgctggaagccatcggcgaagcgctcgatgaaaacggcaaagtgattgtgaccggctgt
ttgggcgcgaatgcaggcacggtgctagatgcttaccccaacgtgctcgccgtgaccggc
cctcatgcgtatgaagcggtgatgcaatcggtgcaccaacatttgccacccttgcacgac
ccatacacgcacctgattccaccgcaaggggtgcgcctgaccccgcgccattacgcttat
ctgaaaatttcggaaggctgtaaccaccgctgttccttctgcattattccctccttgcgt
ggcgatttggtgtcgcgcccgattggggatgtattgcaggaagccgaaaatctggtgaat
gccggggtgaaagaattattggtgatttcgcaagacaccagcgcgtatgggattgatgtg
aaataccggacgggtttctggcaaggtcgcccgatcaaaacgcattcgcagcaattagcg
gaagctttgggtgacatgggcgtgtgggtgcgtttgcattatgtctacccgtatccgcac
gtcgataacctgttgccgttaatggcggaaggcaaaattttgccgtatttggatattccc
tttcaacacgctagccccacggtcttgaaaaacatgcgccgcccagctcatgcggaaaaa
gtgctggaacgtttgggcaaatggcgggcaacctgcccggagattgcagtacgcagcacc
ttcattgtgggtttccccggtgaaacggaagatgactttgaaaccttgctggatttccta
gaggaggcgcaactcgaccgcgtaggcgcgttcacctattcgccagttaagggcgcagac
gctaacgctatcgacggcgcagtgccggaagaggtcaaggaagagcgtctggaacgtttc
atggaattacaagccgaaatcagcgctgccaagctcagccgtttgattggcaaaacgatg
acggtactggtggacgaggcgggtgacgggcaaagtattgcacgtactcaccgtgacgca
cccgaaattgacgggcaagtgatcatcgaaggtgtcgagttaccggtgggtgaatttgtg
caagtgcacattacccacgctgatgaacatgacctgtggggaaaaatttaa
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