Thiothrix winogradskyi: L2Y54_20440
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Entry
L2Y54_20440 CDS
T08347
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
twn
Thiothrix winogradskyi
Brite
KEGG Orthology (KO) [BR:
twn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twn03009
]
L2Y54_20440 (rsmD)
Enzymes [BR:
twn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
L2Y54_20440 (rsmD)
Ribosome biogenesis [BR:
twn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
L2Y54_20440 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltr_RsmB-F
Met_10
PrmA
TRM
SAM_MT
MethyltransfD12
RsmJ
Methyltransf_12
Methyltrans_SAM
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
UJS24273
LinkDB
All DBs
Position
complement(4121226..4121774)
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AA seq
182 aa
AA seq
DB search
MKNNLLRIIGGEWRSRQLRFADVPGLRPTPDRVRETLFNWLQLQIPGARCLDLFAGSGAL
GLEALSRGASEVVMVEKHPAAAKALRDNIALLGAQHAQLVHDDALRFLQRETQGFDLIFL
DPPFRKNLLEPVLEIVLAKSLLQPGGMIYLEHESDARIDFSRFNLNIHRETQAGQVKSFL
LI
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacctattgcgcattattgggggcgaatggcgcagtcgccagttacgtttt
gccgatgtacccggtttgcgcccaaccccggatcgggtgcgcgaaaccttgttcaattgg
ttgcaactgcaaataccgggggcgcgttgcctcgacttgtttgcaggcagtggtgcatta
ggtttggaggctttgtcacggggggcgagtgaggtggtgatggtggaaaagcatccggct
gctgccaaagccttgcgtgacaatattgcgttgttgggggcgcaacacgcgcagttggta
cacgatgatgccttgcggtttctgcaacgggaaacacagggttttgatttgattttcctt
gatccccccttccgtaaaaacttattggaacccgtgctggagatcgtgctggcaaaatct
ttgttgcaaccggggggcatgatctatctggaacacgagtctgatgccaggattgacttc
agccgtttcaacttaaacatccatcgcgaaacccaagcggggcaggtaaaaagtttcttg
ctaatttaa
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