Thiomicrorhabdus xiamenensis: HQN79_06805
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Entry
HQN79_06805 CDS
T07160
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
txa
Thiomicrorhabdus xiamenensis
Brite
KEGG Orthology (KO) [BR:
txa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
txa03009
]
HQN79_06805 (rimO)
Enzymes [BR:
txa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HQN79_06805 (rimO)
Ribosome biogenesis [BR:
txa03009
]
Prokaryotic type
ribosomal protein modification factors
HQN79_06805 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QKI89295
UniProt:
A0A7D4P506
LinkDB
All DBs
Position
complement(1469910..1471283)
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AA seq
457 aa
AA seq
DB search
MSKQNPTIGVISLGCPKATVDTERILTQLRTEGYQLTNSYEDADTVIVNTCGFIDSAVQE
SLDTIGEALEENGKVIVTGCLGAKEDVITEVHPKVLAVSGPAAYQEVVQAVHDVVPPPQH
NPFVDLVPPQGVKLTPKHFAYLKISEGCNHRCTFCIIPSMRGDLVSRPVADVISEAKRLK
EAGVKELLVVSQDTAAYGVDVKYKTDFADGRPTKTSMVGLCEALGEMGGVENFWVRLHYV
YPYPNVEEVIPLMAEGKILPYLDMPLQHANPRVLKAMKRPGNVDRTLERIKKWREQVPNL
TIRSTFIVGFPGETEEEFQDLLDFLEEAQLDRVGCFQYSPVEGAVANDLAEPVPDEIKQD
RWERFMETQQRISAAKMQAKVGQTMQVLVDEIDDQGAVARSMADAPEIDGLVFIEDGHHL
QPGQFVQVEIVAADAYDLWAKPVEEFAEQETSFIELG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacagaatcctacgatcggtgttatcagtctcggttgtccgaaagcgacggtc
gataccgaacgtattctgactcaattgcgtaccgaaggttatcagctgactaacagctat
gaagacgccgatacggttatcgtcaatacgtgcggttttattgacagcgccgttcaggaa
tctctggacaccattggcgaagctctggaagagaacggtaaagttattgttaccggctgt
ctcggtgcgaaagaagatgtgattaccgaagttcacccgaaagtattggctgtctccggc
ccggccgcttatcaggaagtggttcaggcggtgcatgatgtggttccgcccccgcagcat
aatccgtttgtcgacctggttccacctcagggtgttaagctgacgccgaaacatttcgct
tacctgaaaatatccgaagggtgtaatcaccgttgtactttctgcatcattccgtcaatg
cgcggtgatctggtcagtcgtcctgtagccgatgttatttccgaagcaaaacgtcttaag
gaagccggtgttaaagaacttctcgtcgtgtcgcaggataccgccgcttacggtgtcgat
gttaaatataaaaccgattttgccgacggtcgtccgaccaaaacctctatggtcggtcta
tgcgaagccttgggcgaaatgggcggtgtcgagaatttctgggtgcgtttgcactatgtt
tatccttacccgaatgtcgaggaagtgattcctctgatggccgaagggaagatcctgccg
tatctggatatgccgttgcagcacgccaatcctcgtgtcctgaaagcgatgaagcgtcct
ggcaatgtcgatagaactttggaacgcattaaaaaatggcgtgagcaggtgccgaacctg
acgatccgttcaacctttattgtcggtttcccgggcgaaaccgaagaagagtttcaggac
cttctggatttcctggaagaggcgcaactggatcgtgtcggctgtttccagtattcgccg
gtggaaggcgcggtcgccaacgatctggccgagccggttcctgacgagattaaacaggat
cgctgggagcgcttcatggaaacccagcagcgtatctccgccgctaagatgcaggctaaa
gttggtcagacaatgcaggttctggtcgatgaaatcgatgatcagggggcggttgcacgc
tcgatggcggatgcgccggaaatcgacggtctggtctttatcgaagacggacatcatctg
caaccggggcagtttgttcaggtcgagattgtcgctgccgatgcctatgatctttgggct
aagccggtagaagagtttgccgagcaggaaacctcgtttatcgaacttggataa
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