Thalassospira xiamenensis: TH3_19615
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Entry
TH3_19615 CDS
T03639
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
txi
Thalassospira xiamenensis
Pathway
txi03030
DNA replication
txi03410
Base excision repair
txi03420
Nucleotide excision repair
txi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TH3_19615
03410 Base excision repair
TH3_19615
03420 Nucleotide excision repair
TH3_19615
03440 Homologous recombination
TH3_19615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
txi03032
]
TH3_19615
03400 DNA repair and recombination proteins [BR:
txi03400
]
TH3_19615
Enzymes [BR:
txi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TH3_19615
DNA replication proteins [BR:
txi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TH3_19615
DNA repair and recombination proteins [BR:
txi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TH3_19615
NER (nucleotide excision repair)
GGR (global genome repair) factors
TH3_19615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
AJD54025
UniProt:
A0A0B4Y4B1
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All DBs
Position
4310036..4312861
Genome browser
AA seq
941 aa
AA seq
DB search
MTDSAPSTSKSPRRVVLVDGSGFIFRAFHALPPMTSPDGTPVNAVYGFCTMLMKLREDTK
PDHMAVIFDTKGKSFRNDFYPEYKAHRPPPPEELVPQFGLIRDATRAFNLPSIELEGYEA
DDLIATYARQAEAEGSDVIIVSSDKDLMQLVTDRVQMFDAMKNRTIGAPEVLEKFGVTPD
KVIDIQALAGDSVDNVPGVPGIGIKTAAQLIDEYGDLDGLLERAGEIKQPKRREKLIENA
ELARISRDLVTLKTDVPVVEKLDGFELREPDPDVLLSFVSTHGFKSLISKIKAKFGGSVD
ADGVVEPGTGVNDISVEKAEYELMQDEDRLKHWISMAEYAGTVAVDTETTSLNAHQAKLV
GISLSTEPGNGCYIPVGHGQGHGESGEAQGGFDFDAPAEAPTEIEVPKQIPLDRAIALLK
PLLEDPGVLKVGQNLKYDMIVLSRHGINVAPIDDTMVLSYVLDGTSHGHGMDELAELHLD
YKPIKFSDVCGSGKTQITFDQVPLDKALDYAAEDADITLRLHRLLKPRIAQEHMASVYET
LDRPLVPVLAKMESLGIRIDADKLKTLSNDFAKRMAALEETIHEMAGEPFNLGSPKQLGE
ILFEKMSLPGGKKTKTGAWQTGADVLEALAAQGHDLPTKILEWRQLSKLKSTYTDALANH
INPETGRVHTSYGQTNVNTGRLSSNDPNLQNIPIRSEEGRKIRTAFISEPGCKLISADYS
QIELRLLAHVAEIDALRDAFKNGEDIHAATASKVFGVPIEGMDPMVRRKAKAINFGIIYG
ISAFGLANQLGIPQKEAKAFIEAYFEIYPGIRDYMEQAKDFAKKHGFVRTLFGRHIHING
INDKNGMRRSFGERAAINAPIQGGAADIIKRAMIAVPGALLDAGLKTRMLLQVHDELIFE
APEDETEKAVKVIREVMENAAHLSVPLIADAGIGDSWADAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgacagattctgcgccatccaccagcaaatccccccgccgcgtcgttctggttgacggg
tccggctttatcttccgggcctttcacgccttgccaccaatgacaagccccgacggtacg
ccggtgaatgcagtgtatggcttctgcaccatgctgatgaaattgcgcgaagacaccaag
cctgatcacatggcggttatcttcgataccaagggaaaatcgttcagaaacgatttctat
cccgaatacaaggcgcaccgtccgccgcccccggaagaattagtcccccagttcgggctt
atccgtgatgcaacgcgtgccttcaacctgccttcgatcgaacttgaagggtacgaggcc
gatgacctgatcgcgacctatgcccgacaggctgaagccgaaggttccgatgtgattatc
gtgtcttcggacaaggacctgatgcaacttgtcacggaccgggtgcaaatgtttgatgcg
atgaagaatcgcaccattggcgcgccggaagttctggaaaaattcggcgtcacaccggat
aaggtcattgatatccaggcattggctggcgattccgttgataacgtacccggtgtgccc
ggcatcggtatcaaaaccgcagcccaactgattgatgaatatggcgatctggatggcttg
ctggaacgtgcaggagaaatcaagcaacccaaacgccgtgaaaaattgatcgagaatgcc
gaactggctcgcatttcgcgcgatctggtgaccctcaaaaccgacgttccggttgtcgag
aaacttgatggttttgagctgcgcgaacctgatcctgatgttcttttaagctttgtttca
acacatggctttaaatcactgatttctaaaataaaggcaaagttcggtggctctgttgat
gcagacggcgttgtggagccgggaaccggtgtcaatgatatcagcgttgaaaaggcagaa
tatgaattgatgcaggatgaagatcgcctaaagcactggatttcaatggccgaatatgcc
ggtacggttgctgtcgataccgaaaccacatcactgaatgcccatcaggccaaactggtt
ggcatttcgctttcgaccgaaccgggcaatggctgctatatccctgttgggcacggacag
ggtcatggtgaaagtggcgaagcacagggtggatttgattttgatgcccccgccgaggca
ccgacagaaatcgaagtgccaaagcaaatcccgctggatcgcgcgattgccttgctcaaa
ccccttctggaagacccgggtgttctcaaggtcggccagaacctgaaatacgatatgatc
gtattgtcccgtcacggcattaatgtcgccccgatagacgacaccatggtgctgtcctat
gttctggacggcacaagccacggccatggcatggatgaattggccgaactgcatctggat
tacaaaccgatcaagttttccgatgtttgcggatcaggcaaaacacagatcacctttgat
caggtcccgctcgacaaggcgcttgattacgccgccgaagacgccgatatcacgctgcgc
ctgcatcgacttctaaagccgcggattgcacaggaacacatggccagcgtttatgaaacg
ctggatcggccactcgtccctgtactggccaaaatggagagccttggcatccgtattgat
gccgacaagctcaaaaccctgtcgaatgactttgccaagcggatggctgcccttgaagaa
accatccatgaaatggccggtgaaccgttcaatctgggcagcccaaaacagcttggcgaa
atcctgtttgaaaagatgagcctgccgggcgggaaaaaaaccaaaaccggtgcatggcag
accggcgcggacgttcttgaagcattggcggctcagggacatgacctgccgaccaaaatc
cttgaatggcggcagctttcaaagctcaaaagcacctataccgatgctcttgccaatcac
attaatcctgaaaccggccgcgtccacacaagctacggccagaccaatgtgaataccggt
cgcctttcgtcaaacgatcccaacctgcaaaacatcccgatcagaagcgaggaaggccgt
aaaatccgtaccgcctttatctcggagcccggctgtaaactgatttctgccgactattcg
cagatcgagttgcgccttctggcgcatgtggccgaaatcgatgcccttcgtgatgccttt
aaaaacggcgaggatatccatgccgccacggcatccaaggtgtttggtgttccgattgaa
ggcatggatccgatggtccgccgcaaagccaaggccatcaatttcggcatcatttacggg
atttcggcctttggcctcgccaaccagcttggtatcccgcaaaaagaagccaaagccttt
atcgaagcctatttcgaaatttatcccggcattcgcgattatatggaacaggcaaaagac
ttcgccaaaaagcatggctttgtcagaactctgtttggccgtcatattcatatcaacggc
attaatgataaaaacgggatgcggcgaagcttcggcgaacgtgcggccatcaacgcccct
attcagggcggtgccgctgacatcatcaaacgcgccatgattgccgttcccggtgccctt
cttgatgcggggcttaaaacccgcatgctgcttcaggttcatgatgaattgattttcgag
gcccccgaagatgaaaccgaaaaggccgttaaggtgatccgcgaggttatggaaaatgcc
gcacacctgtccgtaccgcttatcgcagatgccggtatcggggatagctgggcggatgca
cactga
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