Ursus americanus (American black bear): 123777000
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Entry
123777000 CDS
T07931
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03440
Homologous recombination
uar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123777000 (BRIP1)
03460 Fanconi anemia pathway
123777000 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uar03400
]
123777000 (BRIP1)
Enzymes [BR:
uar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123777000 (BRIP1)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
123777000 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
123777000 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
F-box_4
Motif
Other DBs
NCBI-GeneID:
123777000
NCBI-ProteinID:
XP_045629375
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MMSSLWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVDESLSKKAEVPSSCCCACHSKNFANTDLNQGTSHHFNSPSTPPSERN
DTSSAYQDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VHHLDAKFASGKTTKLNSPLGKINSFSPQNPPGPCSRCCCSTKQGSSQDSSNTTKKDHGG
KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCM
ELLDGKNGKSCYFYHGVHKISDQHTLQTLQGMCKAWDIEELVSLGKKLKACPYYTARELT
EDAHIIFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLRFAR
DELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERDYESSCKIWSGSEMLLNLHK
MGITTATFPILQGHFSAVLQKEEKVLPIHGKEESRIVPIISASTQIMLKGLFMVFDYLFR
QNSRFADDYKVAIQQTYSWINQIDTSDKNGFFALAKNKKRSRQKTAVHVLNFWCLNPAVA
FSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGQN
LCATFQHTETFEFQDEVGELLLSVCQTVSQGILCFLPSYKLLEKLKERWLDTGLWHNLEL
VKTVIVEPQGGEKTDFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAV
ITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDW
GALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVIGVSKADR
KCIQDSESTLEVTCLKDNSLTYLSEAASLIAPENPRKGEAKMCVQERQCPTITKSPSLPR
GIISGRERNDPVLLEESDQAVKAEKIVISRSTSPTFNKQTKRTSWSSFNSLGRYLTGEIL
TATPKFRSPEDCASSVSTFETEKGCETVLPLTDKCESSSLTVNSSFGPCAQSEITISSIK
IDSNLLKINDSKQLLCCEEALDPDTELSLVGEEAELSTSHRASETEAEDESIYFSPELYD
PTDTNEEKNELVESDRDNRLANHSNCILVEDLFEIRTMKGVDSVQEMKAGDCTDTKLNRL
MHIKESKIGNIGSNVKTTHINELEPGKTCETDIKNFKQSPSKNKGVFSGVR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcactttggtctgaatatacaattggtggggtgaagattacctttccttat
aaagcttacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
caacattgtttgttggagagccctacaggaagtgggaaaagcttagccttactttgttct
gctttagcttggcaacagtctcttagtgggaagccagtagatgaaagcttaagtaaaaaa
gctgaagtaccatcatcatgttgttgtgcatgccattcaaagaattttgcaaacactgac
ttgaaccaaggaacttcacatcatttcaacagcccaagtacaccaccttctgaaagaaat
gacacttcatcagcttatcaagactctcctgaaaaaactacactggctgcaaagctatct
gccaagaaacaggcatccataaaaagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagattaggaagcgtcattgttttgaaaaggag
gtacatcatttggatgcaaaatttgcgtcaggaaagaccacaaaactcaactctccgtta
ggaaagataaactccttttctccacaaaatcctcctggtccctgttccaggtgttgttgt
tctactaaacaaggaagcagtcaagattcctcaaataccactaagaaggatcatgggggg
aaatccaagatacccaaaatatattttgggacacgcacacacaaacagatagctcagatt
actagagagctccggaggacagcgtactcaggggtcccaatgactattctttccagcagg
gatcatacttgtgtccatcctgaagtagtaggtaacttcaacagaaatgaaaagtgcatg
gaattgctggatggaaaaaacggcaaatcctgctatttttatcatggtgtacataaaatt
agcgatcaacacacattacagactcttcaagggatgtgcaaagcctgggatatagaagaa
cttgtcagcttgggaaaaaaactaaaggcatgtccgtattacacagcacgagaactaaca
gaagatgctcacataatattttgtccttacaactatcttctagatgcacagataagggaa
agtatggatatcaatctgaaagaacaaattgtgattttagatgaagctcataacattgaa
gactgtgctcgggaatcagcaagttacagtgtaacagaagttcagcttcggtttgctcga
gatgaactagatagtatggtcaacaataatataaggaagaaagaccatgaacccctacga
gctgtgtgctatagtctaattaattggttagaagcaaactctgaacatcttgtggaaagg
gattatgaatcatcctgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaa
atgggcatcaccactgctacttttcccattttgcagggacatttttctgctgtccttcaa
aaagaagaaaaagtcttaccaattcatggtaaagaggagtcaagaatagtaccgattatt
agtgcttcaactcaaataatgctcaaaggactttttatggtgtttgactatctttttagg
caaaatagcagatttgcagatgattataaagttgctattcaacagacttattcttggata
aatcagattgatacttcagataaaaatggattctttgctctggcaaaaaataagaaacgt
tcaagacagaaaactgcagttcatgtgctaaacttttggtgcttaaatccagctgtggct
ttttcagatattaatggcaaagtttggacgattgttttgacatctgggacattatcacca
atgaaatccttttcatcagaacttggtgttacatttactatccaactggaggctaaccat
gtcattaataactcacaggtttgggtgggcaccattgggtcaggccctaagggtcagaat
ctctgtgccaccttccagcacacagaaacatttgagttccaggatgaagtgggagaactt
ttgttatctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaag
ttattagaaaagttaaaagaacgttggctcgacactggtttatggcataatctagagttg
gtgaagacagtcattgtagaacctcagggaggagaaaaaactgattttgatgaattactg
caggtgtactatgatgcaatcaagtacaaaggagagaaagatggagccctcttggtagca
gtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtc
ataacaatagggattccttttccaaatgtgaaagatctacaggttgaactaaagcgacaa
tacaatgatcagcactcaaaattgagaggtcttttacctggtcgtcagtggtatgaaatt
caagcgtatagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgactgg
ggagctcttattctagtggatgatcgcttcaggagtaatcccagtcgatacatatctgga
ctttctaaatgggtacggcagcagattcagcatcattcaacctttgaaagtgcactggag
tccttggctgaattttccaaaaaacaccagaaggttattggtgtatccaaagcagacaga
aagtgtatacaggacagtgagtctacacttgaagtgacctgtttgaaggacaatagttta
acttacttatcagaagcagcaagtcttatagcaccagaaaatcctagaaaaggtgaagca
aaaatgtgtgtccaagaacgacagtgtcctacaataactaaaagtccatctctaccaaga
ggcatcatctctggaagggaaagaaatgatcctgtattattggaagagtctgaccaggca
gtgaaagcagaaaaaattgtgatttccagatccacaagcccaaccttcaacaaacagaca
aagagaactagctggtctagttttaattctttgggacgttatcttactggtgaaattctg
actgcaacacctaagttcaggtcaccagaggactgtgcctctagtgtttccacttttgaa
acagaaaagggatgtgaaacagttttgccactcactgataaatgtgagtcctcatctctg
acggtgaactcatcatttggaccgtgcgctcaatcggaaatcactatttcatcaataaag
attgattctaatcttcttaaaataaatgattccaaacagctgttgtgctgtgaagaagcc
ctggatccggacactgaattgtctctagttggtgaagaagctgaactttccacttcacat
agagcttctgaaacagaagcagaggatgaatctatctatttttcacctgagctttatgat
cctacggatacaaatgaagaaaagaatgaactagttgaaagtgatagagacaatagattg
gctaatcattcaaactgcattttagttgaagatctttttgaaattagaactatgaaagga
gtggattcagtccaagaaatgaaagctggggattgcacagacacaaagttgaatagactc
atgcatattaaagaaagtaaaattggtaacattggtagtaatgtaaaaacaactcacata
aacgaattggaaccagggaaaacttgtgaaacagacataaagaactttaaacagtctcct
tccaaaaataaaggtgtgttctctggtgttaggtag
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integrated database retrieval system
