Ursus americanus (American black bear): 123792144
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Entry
123792144 CDS
T07931
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03020
RNA polymerase
uar03420
Nucleotide excision repair
uar05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123792144 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
123792144 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
123792144 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123792144 (POLR2A)
03400 DNA repair and recombination proteins [BR:
uar03400
]
123792144 (POLR2A)
Enzymes [BR:
uar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123792144 (POLR2A)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123792144 (POLR2A)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123792144 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
123792144
NCBI-ProteinID:
XP_045653315
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggcggccccccctccggggacagcgcatgcccgctgcgcaccatcaagcga
gtgcagttcggagtcctcagtccggatgaactgaaacgaatgtctgtgacagagggcggt
atcaaataccccgagacgacagagggcggccgccccaagcttggggggctgatggacccg
aggcagggggtgatcgagcggactggccgctgccagacctgtgcaggaaacatgacagag
tgtcccggccactttggccacattgagctggccaaacctgtgtttcacgtgggcttcctg
gtgaagacgatgaaagtgttgcgctgcgtctgcttcttctgctccaagttgctcgtggac
tctaacaacccaaagatcaaggacatcctggccaagtccaaggggcagcccaagaagcgg
ctgacacacgtgtatgacctgtgcaagggcaagaacatctgcgagggcggggaggagatg
gacaacaagttcggcgtggagcagccggagggcgacgaggacttgaccaaagagaagggc
cacggtggctgcgggcggtaccagccccggatccggcgctcgggcctggagctgtacgct
gagtggaagcacgtcaacgaggactcccaggagaagaagatcctgctgagtcccgagcga
gtgcacgagatcttcaagcgcatctcggacgaggagtgtttcgtgctgggcatggagccc
cgctacgcgcggcccgagtggatgatcgtcaccgtgctgcccgtgcccccgctctctgtg
cggcctgccgtggtgatgcagggctctgcccgcaaccaggacgacctcactcacaagctg
gcggacatcgtgaagatcaacaaccagctgcggcgcaacgagcagaacggcgcagcggcc
cacgtcatcgccgaggacgtgaagctcctgcagttccacgtggccaccatggtggacaac
gagctgcccggcttgccccgcgccatgcagaagtctgggcgccccctcaagtccctaaag
cagcgcttgaagggcaaggaaggccgggtccgggggaacctgatgggcaagcgagtggac
ttctcggcccgcaccgtcatcacccccgaccccaacctctccatcgaccaggtcggcgtg
cctcgctccatcgctgccaacatgacctttgcggagattgtcacgcccttcaacatcgac
agacttcaggagctggtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgcgacaacggcgatcggattgacctgcgtttccaccccaagcccagtgatcttcacttg
cagaccggctacaaggtggagcggcacatgtgcgacggagacatcgtcatcttcaaccgg
cagccgactttgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct
acttttcgtttaaatctgagtgtgacaacgccgtacaacgctgactttgacggggatgag
atgaacttgcacctgccacagtctctggagacccgggcagagatccaggagctcgctatg
gtgccacgcatgattgtgaccccccagagcaatcgccccgtcatgggcatcgtgcaagac
acactcacggccgtgcgcaaattcacaaagagagacgtcttcctggagcggggggaggtg
atgaacctcctgatgttcctgtccacgtgggacgggaaggtgccgcagccggccatcctg
aagccgcggcccctctggacgggcaaacagatcttctccctcatcatcccaggccacatc
aactgcatccgcacgcacagcacccatcccgacgacgaggacagcggtccctacaaacac
atctcccccggggacaccaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctctcggcacgtcagctggctcgctggtccacatctcttacctggagatg
ggccacgatgtcacgcgcctcttctactccaacattcagaccgtcattaacaactggctt
ctcatcgagggtcataccattggcattggggactccatcgctgactctaagacctaccag
gacattcagaacactattaagaaggccaagcaggatgtgatagaggtcatcgagaaggct
cataacaatgagctggagcccaccccggggaacactctgcggcagacctttgagaaccag
gtgaaccgcattctcaacgatgcccgagacaagactggctcttctgcccagaagtccctg
tctgagtacaacaactttaagtccatggttgtgtctggagccaaaggttccaaaatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggatcccgttt
ggattcaagcaccggactctgcctcacttcatcaaggatgactacgggcccgagagcaga
ggctttgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccacgcc
atggggggtcgcgaggggctcatcgacacggccgtcaagactgctgagactgggtacatc
cagcggcggctcatcaagtctatggagtcggtgatggtgaagtacgacgccaccgtgcgc
aactccatcaaccaggtggtacagctgcgctacggtgaggacggcctggctggcgagagc
gtcgagttccagaacctggctaccctgaagccgtccaacaaggcttttgagaagaagttc
cgcttcgactacaccaacgagagggctctgcggcgcactctgcaggaggacctggtgaag
gatgtcctgagcaatgcgcacattcagaacgagctggagcgggaattcgagcggatgcgt
gaagaccgggaggtgctcagggtcatcttcccaactggtgacagcaaggtggtcctcccc
tgtaacctgctgcgcatgatctggaacgcccagaagatcttccacatcaacccccgcctc
ccctccgacctgcaccccatcaaggtcgtagagggagtcaaggaactgagcaagaagctg
gtgatcgtgaacggggatgatcccctgagccggcaggcgcaggagaacgccacgcttctc
ttcaacatccacttgcggtccacgctgtgctcgcgccgcatggccgaggagttccggctc
agcggggaggccttcgactggctgctcggggagatcgagtccaagttcaaccaagccatc
gcccatcctggggagatggtgggcgccctggccgcacagtccctcggagaaccggccacc
cagatgaccttgaacacctttcactatgctggtgtgtctgccaagaacgtgaccctgggt
gtgccccgcctcaaggagctcatcaacatctccaagaagccgaagaccccttcgcttacc
gtcttcctgctgggccagtctgctcgagatgctgagagagccaaggacattctgtgccgt
ctggaacacacgacattgaggaaggtgaccgccaacacagccatctactacgaccccaac
ccccagagcacggtagtggcagaggatcaggagtgggtgaacgtctactatgagatgccg
gacttcgacgtggcccggatctccccatggcttttgcgggtggagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgccgagaagatcaatgccggtttcggc
gatgacttgaattgcatcttcaatgacgataatgctgagaagctggtgctccgaatccgc
atcatgaacagcgacgaaaacaagatgcaagaggaagaagaggtggtggacaagatggac
gacgatgttttcctacgctgcatcgagtccaacatgctgaccgatatgaccctgcagggc
atcgagcagatcagcaaggtgtatatgcacctgccgcagacggacaacaagaagaagatc
attatcacggaggatggggagttcaaggccctgcaggagtggatcctggagacagacggt
gtgagcctgatgcgggtgctgagtgagaaggacgtggaccctgtgcgcactacgtccaac
gacatcgtggagatcttcacggtgctgggcatcgaagccgtgcggaaggctctggagcgg
gagctgtaccatgtcatctcctttgacggttcctacgtcaattaccgccacttggctctt
ctgtgtgacaccatgacctgtcgcggccatttgatggccatcacccgacatggggtcaac
cgccaggatacgggccctctcatgaagtgctcttttgaggaaacggtggacgtgctgatg
gaggcagccgcgcacggagagagtgaccccatgaagggggtgtctgagaacatcatgctg
ggccagcttgccccggccggcaccggctgcttcgacctcctgctcgatgcggagaagtgc
aagtacggcatggagatccccaccaacatccccggcttgggggccgctggacccactggc
atgttcttcggctcggcgcccagtcccatgggaggaatctctccggccatgactccctgg
aaccagggcgcaactccagcctatggcgcctggtcccccagtgttgggagtggaatgacc
ccgggggcagccggcttctctcccagcgccgcctcagacgccagcggcttcagccccggg
tactcccccgcctggtctcccacgccaggctccccgggctcccctggcccctcgagcccg
tacatcccctcaccaggtggtgccatgtctcccagctactccccaacatcgcctgcctat
gagcctcgctcccctgggggctatacgcctcagagcccctcttactcccccacttcgccg
tcctactctcccacctctccgtcctactctccaactagtcctaactacagtcccacgtca
cccagctactccccgacctctcccagctactccccgacctcacctagctactctcccacc
tctcccagctactctccaacctctcccagctactccccaacctctcccagctactctcca
acctctcccagctactccccgacctctcccagctactcgcccacctctcccagctactcc
ccaacctctcccagctactcacccacttctcccagttactcgcccacgtccccgagctac
tcgcccacgtccccgagctactctcccacgtccccgagctattccccgacatccccgagc
tactcgccaaccagccctaactattctccaaccagtcctaattacaccccgacgtcaccc
agctatagcccgacatcacccagttactccccgacaagtcccaactacacacccacgagc
cctaactacagcccaacctctccaagttactctccaacttcacccagctactccccaacc
tcgccaagctactccccatcaagcccacggtacacaccacagtctccaacctacacccca
agctcccccagctacagccccagctccccgagctacagcccaacgtcgccgaagtacacc
cccaccagtccctcctacagccccagctccccggagtacaccccgacctcccccaaatat
tcgcctaccagcccaaaatactcgcccacctcccccaagtactcacccaccagccccacc
tactcgcccaccaccccaaagtactccccaacatcccctacttactcgccgacctctccg
gtgtataccccaacctcccccaagtactcgcctactagccccacctactcgcccacctcc
cccaagtactcgcccaccagccccacctactcgcccacctcccccaaaggctctacctac
tcacccacttcccctggctactcgcccaccagccccacctacagcctcaccagtccggcc
atcagcccggacgacagtgatgaggagaactga
DBGET
integrated database retrieval system
