Ustilago maydis: UMAG_02446
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Entry
UMAG_02446 CDS
T01021
Name
(RefSeq) putative DNA-directed RNA polymerase III core subunit RET1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
uma
Ustilago maydis
Pathway
uma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UMAG_02446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uma03021
]
UMAG_02446
Enzymes [BR:
uma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UMAG_02446
Transcription machinery [BR:
uma03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
UMAG_02446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
23563190
NCBI-ProteinID:
XP_011388732
UniProt:
A0A0D1E1A2
LinkDB
All DBs
Position
5:1213435..1216944
Genome browser
AA seq
1169 aa
AA seq
DB search
MALPSSIVEMAQASGHLPHMASDDPIAALKAANYKGKGLMDPIKTVEDKWELVPAFLQVK
GLVKQHIDSYNYFVDHDLKNIIKANEKITSDIDPKFYLKYTDITVGEPRRYDGDALQRPI
TPHECRLRDITYSAHIFVNIEYTRGGKIIRRKNVAIGRIPVMLRSNKCVLANKSEKELAK
MSECPLDPGGYFVVKGTEKVILVQEQLSKNRIIVEADTKKGTVSASVTSSTHERKSKSYV
LTKHGKIYLKHNSLHEDIPIAVAFKAMGIQADREILQLVAGHDDIHKELFAINLEEAARL
GIYTRKQALDFIGARAKASRKPLSMRRPLSEEALDVLATVIMAHVPVERLNFRPKAIYIA
SMVRRVLMAMQDEKKVDDRDYVGNKRLELAGQLLSLLFEDLFKKFNSDLKMNIDKVLKKP
NRTVEFDAFNQFHFNGDYITSGFVRAISTGNWSLKRFKMERAGITHVLSRLSFIAALGMM
TRISSQFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALTTHITTDVEEEPIA
RIAFTLGVEDIHLLTGAELYRPDSYVVYLNGNVLGVTRFPQRFVLQFRRLRRAGRVSEFV
SVYTNHHHQTVYIASDGGRICRPLIIVDAFTGHPRVTESHMQQLKSGARRFDDFLHNGLI
EYVDVNEENDANIAMYEHEIKPQYTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAM
GKQGQGAIGYNQLIRIDTLLYLMLYPQQPMVKSRTIELIGYDKLPAGTNSMVAVMSYSGY
DIEDALVLNKASLDRGFGRSQTMKKSSTVIRKYPNGTHDRLADAPVDDTTGKRQKRYDIL
EADGIAGVGERVEQGDVYVNKQTPVNANDNSSAAIMIGASNAAASVAYKSAPLSYKPPVS
GYIDQVLITDTDSDQTLIKALIRQTRRPELGDKFSSRHGQKGVCGLIVQQEDMPFTDQGI
NPDIIMNPHGFPSRMTVGKMIELLSGKAGVITGTLQYGTAFGGSKVEDMSALLVENGYNY
AGKETLTSGITGQPLECYVYFGPIYYQRLKHMVQDKMHARARGPRAVLTRQPTEGRSRDG
GLRLGEMERDCLIGYGATQLLLERLMISSDAFTVHACQKCGLMGYNGFCPYCSSSKHVVQ
LTIPYGTKLMLQELMAMQVVPRLVLEDAV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccgtctagcatcgtcgagatggcgcaggcatcaggtcacttgccacacatg
gcttcagatgatccgattgcagcgctcaaggccgccaactacaaaggcaagggtctcatg
gaccctatcaagacggtcgaggacaagtgggagcttgttcccgcctttctccaagtcaaa
gggttagtcaagcagcacatcgactcttataactactttgttgaccatgacctcaagaat
atcatcaaggccaacgaaaagatcacttccgacattgatcccaagttctacctcaagtac
accgatatcaccgtaggagagcctcgcagatacgacggcgatgctttgcaaaggcccatc
acgccgcacgaatgccgacttcgagacatcacctactcggcccacatatttgtcaacata
gagtatacccgaggtggcaagatcatccgccgcaagaatgtcgccattggtcgcatcccc
gtcatgcttcgcagcaacaaatgcgttctcgccaacaagtccgaaaaggaacttgcaaag
atgagtgaatgccccttggatccaggaggatattttgtggtcaagggaacagaaaaagtg
attctcgttcaagaacagctcagtaagaacaggatcatcgtcgaggccgacacgaaaaag
ggtactgtgtcagcctcggttacttcatcaacccacgagcgcaagtccaaatcgtacgtt
ctcacaaaacacggcaagatctatctcaagcacaactcgcttcacgaagatattccgatc
gccgtcgccttcaaagccatgggtatccaagccgatcgcgagatccttcagcttgttgca
ggtcacgacgatatccacaaggagctttttgccatcaacctcgaggaggccgctcgattg
ggcatctacacgcgcaaacaagcgcttgactttatcggtgctcgcgccaaagcatcgcgc
aagccgctctcgatgcgacgtccactctccgaggaggcgctcgacgttcttgctactgtc
atcatggctcacgtgcctgttgagaggctcaacttccgtccaaaggcaatttacatcgca
tccatggttcgcagagtgctcatggccatgcaggacgagaagaaggtcgacgaccgcgat
tacgtcggaaacaagaggctcgaactggcaggacagctgctttcgcttctttttgaggac
ctcttcaaaaagttcaactcggatctcaagatgaacatcgacaaggtgcttaagaagccc
aaccgtactgtcgagtttgacgccttcaaccaattccacttcaatggcgactacatcacc
tcgggctttgtgcgtgccatctcgacgggcaactggagcttgaagcgtttcaagatggaa
cgcgccggcattacccacgttctcagtcgcttgtctttcattgctgcattgggaatgatg
accaggatcagctcgcagtttgaaaagacgagaaaggtctcgggtccacgcgcgctgcaa
ccatcacagtggggcatgctgtgtccctcggataccccagaaggtgaagcgtgtggtctc
gtaaaaaatctggcgcttaccacgcacatcaccacggacgtcgaagaagagccgattgct
aggatcgccttcacgctcggtgtcgaagacatccaccttctcaccggtgcagagctttac
cgtcccgattcgtatgttgtctacctgaacggtaacgtgctgggcgtgacgcgattcccg
cagcgctttgtactgcagtttcgtcgtctgcgccgtgctggtcgcgtgtccgagttcgtc
tcggtgtatacgaaccaccatcaccagaccgtctacatcgcctcggacggtgggcgcatc
tgtcgacctctgatcattgtcgatgcgtttaccggtcatccgcgtgtcaccgagtcgcac
atgcagcagctcaagtcgggcgctcgtcgctttgacgatttcctccacaacggtctgatc
gagtacgtcgacgtcaacgaagaaaatgacgccaatattgccatgtacgagcacgagatc
aagccgcagtatacgacgcatctcgagatcgaaccattcaccatcctcggcgccgtggca
ggtctgatcccctatcctcatcataaccagagtccgagaaacacgtatcagtgtgcgatg
ggtaaacaaggccagggagcgatcggttacaaccaactgattcgcatcgacacactgctc
tatcttatgctataccctcaacagcccatggtgaaatcacgcacgatcgagctgatcggc
tacgacaagcttccggcggggaccaacagcatggtagcggtgatgtcctactcgggctac
gatatcgaggatgcgctggtgttgaacaaggcatctctggatcgtggattcgggcgttcg
cagacgatgaagaagtcatcgacagtgatccgcaagtatccgaacggcacccatgaccgg
ttggcggatgcacctgtggatgataccacgggcaagcgacagaagcggtacgacattttg
gaggccgacggcattgcgggagtcggtgagcgtgtcgagcaaggcgatgtgtacgtcaac
aagcaaacaccggtgaatgcgaacgacaactcgtcagcagctatcatgatcggcgcgtcc
aacgctgcggcttccgtggcgtacaaatcagcaccactatcgtacaaaccacctgtatcg
ggctatattgaccaggtgctcatcacggacacggactcggaccaaacattgatcaaggcg
ctgatccgacaaacacgccggccggagctcggcgacaagttttcctcgcgacacggtcaa
aagggtgtatgtggtctgattgtgcagcaggaagacatgccgtttacggaccaaggtatc
aacccagacatcattatgaatccgcacggattcccgtctcgaatgacggtcggaaagatg
attgagctgctctcgggaaaagcgggagtgatcacgggcactttgcagtacggcactgcg
tttggcgggtccaaagtcgaggatatgtcggcgctgctcgtcgagaacggttacaactat
gcgggcaaagagacgctcacctctggtatcactggtcaacctctggaatgctacgtctac
ttcggtccgatctactaccaacgtctcaaacacatggttcaagacaagatgcatgctcga
gcgcgcggtcctcgtgccgtgctcacacgacagcccaccgagggtagatccagagatgga
ggtctaagattgggcgagatggagagggactgtctgattggctacggtgcaacccagttg
ctgttggagaggttgatgatcagctcggatgccttcactgtgcatgcctgccagaagtgc
ggcttgatgggctacaacggcttctgtccctactgcagcagcagcaaacatgttgttcag
ctcaccattccgtacggtaccaagttgatgctccaggaactaatggctatgcaggtggta
cccaggttggtgttggaggatgccgtctag
DBGET
integrated database retrieval system
