Ustilago maydis: UMAG_03070
Help
Entry
UMAG_03070 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
uma
Ustilago maydis
Pathway
uma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UMAG_03070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_03070
Enzymes [BR:
uma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
UMAG_03070
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
UMAG_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clp1
CLP1_P
CLP1_N
AAA_16
AAA_28
SRPRB
Pro_CA
DnaG_helical
Motif
Other DBs
NCBI-GeneID:
23563645
NCBI-ProteinID:
XP_011389435
UniProt:
Q4P9Z3
LinkDB
All DBs
Position
7:784588..786477
Genome browser
AA seq
629 aa
AA seq
DB search
MDGQAEGSSQYRRVHLPPRSEYRFELEPHERLSIRLVQGRTQSGEDPDAEIFGAELVGGS
QERWYPFGDEAKAAVSSWRGAEIEVAGSASTEYLAEEPSPVYTAYSNLHLYLERKRIQAR
QALRADAKLLTTLASSVLDPSYIAPRTTDPNTETESDPSGTAAATVYRPEGQGPRVMILG
PESAGKTSLVKLLANYALRSPAVASLGKGEAAKVAESLRTGGDGIIYPNMEDNLSEEAKK
QKREEEKRSDITGWWPVVVNLDPSDGAPPLPCCLSALPLSPLPLASLPSASPAYAFGTNT
STTGAIPPGTSTAHGVAPLSLWLGKENLRENERHFRRVVDWLAEGVERRFARDFRSRMSG
LIIDTPGVITADARNKYAFIQHCVKAFKVDTIVVLGHEKLNLEMTKLFASPAVTTVETAE
IPGSAGQRLPRVNVIKLPKSGGVVELDETYRSRLKALQVKTYFYGGSTSGSANTDGGVPK
PVLPGHSDPLGGVPSLSPYSTTIPFDLLEIYKVGQESLAPSSALPIGASRTVTETQLVKL
DPTNSAADQTSLLHSVLALIQPPRGGGGAGQPDSSTNPTDDEIIGAPILGFVHVADIDTV
RKKITVLSPSAGRLPSKTAIIGSLDWQDV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggacggacaagcagagggatcgtcccagtacaggcgcgttcatctccctccgcgttcc
gagtaccgtttcgagctcgagccgcacgagagactgtcgattcgactcgtccagggccgc
acgcaaagcggtgaggacccggatgccgagatcttcggtgctgaacttgttggtggatcg
caggaacgatggtatcctttcggagatgaggctaaagctgctgtctcttcgtggagagga
gccgagatcgaagttgccggatccgcttctacagaatacctcgccgaggaaccatctccg
gtttatacggcatattccaacttgcacctctacctggaacgcaaacgtattcaagcacgt
caagcactgagagctgatgcaaagctgctcacgacactggcgagctcggtcctcgaccct
agctacatcgctcctcgcactacagacccgaataccgagaccgaatccgatccgagtggc
acggcggcggccaccgtgtatcgacccgagggacagggtccgagagtcatgattctaggt
cccgagtcggcaggcaaaacaagtttggtcaagcttctcgccaactatgcgcttcggtcg
cccgctgtcgctagtcttgggaaaggcgaagcggccaaagtggccgaaagtctgcgcaca
ggtggagacggtatcatctatcccaacatggaggacaacttatcagaagaagccaagaag
cagaagcgcgaggaggaaaagaggagcgatatcaccggatggtggcccgtcgtggtgaac
cttgatccgagcgatggtgcgccgccgctgccgtgctgtctgtcggctttgccactgtct
ccgctcccgctcgcatcgttgccatccgcttctccggcatacgcattcggtaccaacaca
agcacaacaggtgcgatcccaccaggcacatcgactgcccacggagtggctccgctctca
ctctggctcggaaaggaaaacctacgcgaaaatgagcgtcacttccgccgtgtcgtcgac
tggcttgcagagggagtcgaacgccgatttgcacgcgatttccggtcacgcatgtcgggt
ctcatcatcgacactccaggcgttatcactgcagatgcacgtaacaaatacgccttcatc
caacactgcgtcaaagcgttcaaggtcgatacgattgtcgtgctcggccatgagaagctc
aatttggagatgaccaagctgtttgcgtctcctgcggtcaccacagtcgaaacagcagag
atcccaggatcagcaggacagcgcttacctagagtcaacgtgatcaagcttcccaagagt
ggaggcgtagtcgagctggacgagacctatcgatcgcgcctcaaagctctgcaggtgaaa
acctacttctacggtgggtccacctctggttctgccaacacggacggcggggttccgaag
cccgttctaccgggacactcggaccctttgggtggcgtaccctctctcagcccttacagc
accacgatcccgtttgatttgctggaaatctacaaggtcggccaagagagtctcgctcca
tcctcggccttgcccatcggggcgtcacgtactgtcaccgagacgcagcttgtcaagttg
gatccgaccaactcggcggctgatcagacgagcttgctgcacagtgtcctggctctcatc
caaccaccacgcggcggaggtggagcaggacagccagattcttccacaaacccgaccgac
gatgagatcatcggtgcgcccattctgggctttgttcacgtcgcagacatcgatactgtc
cgtaagaagataaccgtactctctcctagcgcaggaaggctgcccagcaagacggccatt
atcggctcattggattggcaggacgtgtga
DBGET
integrated database retrieval system
