Umezawaea sp. Da 62-37: RM788_40340
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Entry
RM788_40340 CDS
T09853
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00362
Benzoate degradation
ume00624
Polycyclic aromatic hydrocarbon degradation
ume01100
Metabolic pathways
ume01120
Microbial metabolism in diverse environments
ume01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RM788_40340 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
RM788_40340 (pcaH)
Enzymes [BR:
ume01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RM788_40340 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
WNV84357
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All DBs
Position
8866675..8867415
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AA seq
246 aa
AA seq
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MPADTSRRKPQAHYRPDPESHPPVSYPAYRSNVARAPKHPLVLLPQRLGEITGPLLGEER
VGRNDNDLTVQHGEEPQGQRIIVGGRVLDGDGRAIPNTLVEVWQANAGGRYRHDLDRHPA
PLDPNFSGVGRTMTDADGNYRFITIAPGAYPWKNHHNAWRPAHIHFSVFGRAFTQRLITQ
MYFPGDPLFDQDPIFTSARPAAREAMVAKFDLDSTVPEWAVGYLWDIVLRGSDPTPFEDE
EDHDDE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccgacacgtcgcgccgcaagccgcaggcgcactaccggcccgaccccgaatcg
cacccgccggtgtcgtaccccgcgtaccggtccaacgtcgcccgcgcccccaagcacccg
ctcgtcctgctgccgcaacggctcggcgagatcaccggcccgctgctgggcgaggagcgg
gtcggccgcaacgacaacgacctgaccgtccagcacggcgaggagccccagggccagcgg
atcatcgtcggcggccgggtgctcgacggcgacggcagggccatcccgaacacgctcgtc
gaggtgtggcaggcgaacgcgggcggccggtaccggcacgacctcgaccggcaccccgca
ccgctggaccccaacttctccggcgtcggccgcacgatgaccgacgcggacggcaactac
cggttcatcacgatcgcgcccggcgcgtacccgtggaagaaccaccacaacgcctggcgc
cccgcgcacatccacttctcggtgttcggccgcgcgttcacccagcggctgatcacccag
atgtacttccccggcgacccgctgttcgaccaggacccgatcttcacctccgccaggccc
gccgcgcgcgaggcgatggtcgcgaagttcgacctcgacagcacggttcccgagtgggct
gtggggtacctctgggacatcgtgctgcgcggcagcgacccgaccccgttcgaggacgag
gaagaccacgacgatgagtga
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