Umezawaea sp. Da 62-37: RM788_40910
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Entry
RM788_40910 CDS
T09853
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RM788_40910 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ume01007
]
RM788_40910 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ume03016
]
RM788_40910 (lysS)
Enzymes [BR:
ume01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RM788_40910 (lysS)
Amino acid related enzymes [BR:
ume01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RM788_40910 (lysS)
Transfer RNA biogenesis [BR:
ume03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RM788_40910 (lysS)
BRITE hierarchy
Motif
Pfam:
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
WNV84466
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All DBs
Position
complement(8986706..8988343)
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AA seq
545 aa
AA seq
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MQVQTEADWVSRFADDVIAEAERRAPGKPIVCASGLSPSGPVHLGNLREVMTPHLVVDEI
RRRGHDVVHLLSWDDFDRFRKVPVGVDPTWAEHIGKPLTSVPAPAGSEHPNWAEHFKAPM
IAALAELGITYRGVSQTRMYTSGAYRDQVLLAVKERAKIDAILDRYRTKDKPATEQDDEE
QYFPYKPYCSECDRDLTTVTSYDDETTELTYTCVCGHSETVLLSEHTHGKLVWKVDWPMR
WAFEGVVFEPSGVDHSSPGSSFVVGGQIVREVFDGKQPIGPMYAFVGISGMAKMSSSKGG
VPTPGDALEILEAPLVRWLYARRKPNQSFKVAFDQEVQRTYDEWDALERKIADGTAVPVD
VTAHDRAVRTAEGTLPRTPIPIAYRTLASIVDITTGDPEQTLRIVRDLDPERPIESLDQV
RPRLDRAQHWITNQVPLDQRTRVREHADVDLIQSLDEQQRESLRLLLQGLDSHWSLDGLT
DLVYGVPKDQAGLPRDTKPTPELKVAQRTFFALLYRLLVGVETGPRLPTLLLAVGAGRVR
KLLSD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcagaccgaggccgactgggtctcccgtttcgcggacgacgtcatcgccgaa
gccgaacgccgggcgcccggcaaacccatcgtctgcgcgtcgggcctgagcccgtccggt
ccggtccacctcggcaacctccgcgaggtgatgaccccgcacctggtcgtcgacgagatc
cgccgccggggccacgacgtcgtgcacctgttgtcgtgggacgacttcgaccggttccgc
aaggtgccggtcggcgtggacccgacgtgggccgagcacatcggcaagccgctgacgtcc
gttcccgcgcccgcgggcagcgagcacccgaactgggccgagcacttcaaggcgccgatg
atcgccgcgctcgcggagttgggcatcacctaccgcggcgtcagccagacgcggatgtac
acgtccggcgcgtaccgcgaccaggtgctgctggcggtgaaggagcgcgcgaagatcgac
gcgatcctcgaccggtaccgcaccaaggacaagcccgccaccgaacaggacgacgaggag
cagtacttcccgtacaagccgtactgctcggagtgcgaccgcgacctgacgacggtcacg
tcctacgacgacgagaccaccgagctgacctacacctgcgtctgcgggcacagcgagacc
gtgctgctgagcgagcacacgcacggcaagctcgtgtggaaggtcgactggccgatgcgc
tgggcgttcgagggcgtcgtcttcgaaccgtccggtgtggaccactcgtcccccggctcg
tcgttcgtcgtcggcggtcagatcgtgcgcgaggtgttcgacggcaagcagccgatcggc
ccgatgtacgcgttcgtcggcatctccggcatggcgaagatgagcagctccaagggcggc
gtgcccacgcccggtgacgcgctggagatcctggaggccccgctggtgcgctggctgtac
gcgcgccgcaagccgaaccagtcgttcaaggtcgcgttcgaccaggaggtgcagcgcacc
tacgacgagtgggacgcgctggagcgcaagatcgccgacggcaccgccgtgccggtcgac
gtgacggcgcacgaccgcgcggttcgcacggccgagggcacgctgccccgcacgccgatc
ccgatcgcctaccgcacgctcgcgtccatcgtggacatcacgaccggcgaccccgagcag
acgctccgcatcgtccgcgacctggacccggaacggccgatcgagtcgctcgaccaggtc
cgcccccggctcgaccgcgcccagcactggatcaccaaccaggtcccgctggaccagcgg
acccgcgtccgcgagcacgccgacgtggacctgatccagtccttggacgagcagcagcgc
gagtccctgcgcctgctcctccagggtctcgacagccactggtcgctggacggcctgacc
gatctggtctacggcgtgccgaaggaccaggcgggcctgccgagggacaccaagcccacg
ccggagctgaaggtcgcgcagcgcaccttcttcgcgctgctgtaccgcctgctggtcggc
gtcgaaaccggccctcgcctgcccacgctgctgctggccgtgggcgccggccgggtgcgc
aagctgctgtcggactga
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