Umezawaea sp. Da 62-37: RM788_48950
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Entry
RM788_48950 CDS
T09853
Name
(GenBank) extradiol ring-cleavage dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
ume
Umezawaea sp. Da 62-37
Pathway
ume00362
Benzoate degradation
ume00624
Polycyclic aromatic hydrocarbon degradation
ume00627
Aminobenzoate degradation
ume01100
Metabolic pathways
ume01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ume00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RM788_48950
00627 Aminobenzoate degradation
RM788_48950
00624 Polycyclic aromatic hydrocarbon degradation
RM788_48950
Enzymes [BR:
ume01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
RM788_48950
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
WNV85964
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All DBs
Position
10872614..10873477
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AA seq
287 aa
AA seq
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MAELVAVIASTHHPFYYRASTSTGEERPPFADEWVRKVEAFRETLTKARPDVLVMVGSDH
FHQLWLDNMPQFLVGKAPFYDANWANEEREFGLPRMVLRGQEDLSAYVLREGLDAGFDLA
FSNELRIDHSITCPIITLRPEADLPIVPIYTNIFAPPLPQPKRFVQLGRTIRELIESWPS
DQRVAVIGTGHLSLELGGPRQFGPHGPDPEFDRKAVEWIAGGDVEKCLAEVSLESLHLPG
NATHGFMDFMLMMGVAGEGQKADYVDTYDLFHTMEAYFTWYPQGGAR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactggtcgcggtcatcgcgtccacgcaccaccccttctactaccgcgccagc
acgtcgacgggggaggagcggccgccgttcgccgacgagtgggtgcgcaaggtggaggcg
ttccgcgagacgctgacgaaggcgcggccggacgtgctggtgatggtgggctcggaccac
ttccaccagctgtggctggacaacatgccgcagttcctggtgggcaaggcgccgttctac
gacgcgaactgggccaacgaggaacgggagttcgggctgccccggatggtactgcgcggg
caggaggacctgtcggcgtacgtgctgcgggagggcctggacgccgggttcgacctggcg
ttttcgaacgagctgcggatcgaccactcgatcacgtgcccgatcatcacgctgcggccc
gaggcggacctgccgatcgtccccatctacaccaacatcttcgcgccgccgctgccgcag
cccaagcggttcgtgcagctggggcggacgatccgcgagctgatcgagtcctggccgtcg
gaccagcgggtggccgtcatcggcacggggcacctgtcgctggaactcggtgggccgagg
cagttcgggccgcacgggccggacccggagttcgaccgcaaggccgtcgagtggatcgcc
ggtggtgacgtcgagaagtgcctggccgaggtgagcttggaaagcctgcacctgcccgga
aacgccacgcacgggttcatggacttcatgctgatgatgggggtggccggggaggggcag
aaggcggactacgtcgacacctacgacctgttccacacgatggaggcctacttcacctgg
tacccgcaaggcggtgcgcgatga
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