KEGG   Undibacterium sp. KW1: UNDKW_3085
Entry
UNDKW_3085        CDS       T08678                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
und  Undibacterium sp. KW1
Pathway
und00740  Riboflavin metabolism
und01100  Metabolic pathways
und01110  Biosynthesis of secondary metabolites
und01240  Biosynthesis of cofactors
und02024  Quorum sensing
Module
und_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:und00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    UNDKW_3085 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    UNDKW_3085 (ribD)
Enzymes [BR:und01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     UNDKW_3085 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     UNDKW_3085 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: BBB61358
UniProt: A0A6N4T6U4
LinkDB
Position
complement(3428293..3429390)
AA seq 365 aa
MDKQADYAYMQQALELARRATIETSPNPKVGCVIVRDGQVLGQGWTQPVGQAHAEVQALR
DAAAKGHDVRGATAYVTLEPCSHFGRTPPCANGLRDAGIARVVAAMQDANPQVAGRGLSI
LREAGVEVECGTFPDLALQARELNIGFFQRMETGKPWVRMKVAGSLDGITALSNGQSQWI
TGSAARRDGHQWRARADAILTGIGTVLADDPMMNVRGVDTPRQPQKIIVDSHLRMSPQAK
VLQGGALIVCAEPDAEKQVQLEQAGAEVICLPGANQQVDLPALMQELGRRQINELHVEAG
ATLNGALIAQGCVNELLLYLAPKLLGSGAGLFNLPELTHVDQASVLQFHEISQVGDDLRV
LARLK
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggataagcaggctgattatgcttacatgcagcaagcgctggagctggccagacgcgcg
accatagaaacttcacccaaccccaaagtgggttgcgtgatagtgcgtgatggtcaggtg
ctggggcagggctggacgcagccagtagggcaggcgcatgctgaggtgcaggccttgcgt
gacgccgccgcaaaaggccatgatgtgcgtggcgctacagcctatgtcacgctggaacca
tgtagccattttggccgtacaccaccttgtgcaaacggtttgcgtgatgccggtattgcg
cgtgtggtcgctgccatgcaggatgccaatccacaagtagcagggcgcggtttaagtatc
ttacgggaagctggtgttgaagttgagtgtggtacttttcctgatctcgccttgcaggca
cgcgaattgaacataggttttttccagcgcatggaaaccggcaagccctgggtcaggatg
aaagttgccggtagcctcgatggcatcaccgccttgagcaatggccaaagccagtggatt
accgggtcagcagccaggcgggacggtcatcaatggcgggcgcgtgctgatgcgattttg
actgggataggtaccgtgctggcagatgaccccatgatgaatgtccgcggcgtagacacg
ccacgtcagccacaaaaaatcattgttgactcccatctgcgcatgtcgccacaagccaaa
gtgttgcaaggcggggccttgattgtctgtgctgagcctgatgctgaaaaacaggtgcaa
ctggaacaggccggggcagaagtgatttgcttgccaggtgcaaatcagcaagtcgatttg
cccgccctgatgcaagaactgggacgcaggcaaatcaatgaattgcatgtggaagcaggc
gcgactctgaacggtgcattgattgcgcaaggctgtgtcaatgaattattgctgtacctg
gcgcccaagctgttgggtagtggagctggtttatttaatttacctgaattgacacatgtg
gatcaggcgagtgttttgcaatttcacgaaatcagccaagtgggtgatgatttgcgggta
ctggctcgcttgaaataa

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