Usitatibacter palustris: DSM104440_01317
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Entry
DSM104440_01317 CDS
T06995
Symbol
ldc
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
upl
Usitatibacter palustris
Pathway
upl00330
Arginine and proline metabolism
upl00480
Glutathione metabolism
upl01100
Metabolic pathways
upl01110
Biosynthesis of secondary metabolites
upl04148
Efferocytosis
Module
upl_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
upl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DSM104440_01317 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
DSM104440_01317 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DSM104440_01317 (ldc)
Enzymes [BR:
upl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
DSM104440_01317 (ldc)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QJR14516
UniProt:
A0A6M4H4M4
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Position
1301782..1302966
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AA seq
394 aa
AA seq
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MPRSATVKNLRPQPQFPLDTHPEVSLDFDRVKKHLAKHGYKKPVLLIDLDIVRAKTKRFR
AALPRVRPHFAVKANPDPRVLKVLIQEGSGFEIASIAELDLLLSLGVPVAEIFYSNPMKS
RAYLEYAAAKGVEWYVVDCVEEVVKVKSVKADAKMYLRIDAPNIGSDWPLAGKFGAHMND
VPEIILAAAACQADLAGVTFHVGSQCLNPENWRVGMERARKVFASMRTAGLKPRLLNLGG
GYPVRHVKPMPSIETIADLINRELRHFGPEIQIIAEPGRYLVSDAGYFICRVVGTATRND
QRWMYWDAGVFGGVIETTEGLRYNIYTDRDGEPVAWNVAGPTCDSVDVVMRDELLPGDLQ
EGDFIFIKNAGAYTTAYASNFNGFPLPDVATIGS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgccacgatctgccaccgtcaagaacctccgcccgcagccccagttcccgctggatacc
catcccgaagtcagtctcgacttcgaccgcgtcaagaagcacctcgccaagcacgggtac
aagaagcccgtcctcctgatcgacctggatatcgtccgcgcgaagacgaagcgttttcgt
gccgcgctgccgcgcgtgcgcccgcacttcgcggtgaaggcgaatcccgatccgcgcgtc
ctgaaggtgctgatccaggaaggctcgggcttcgagatcgcgtcgatcgcggaactcgac
ctgctgctgtcgctcggcgtgccggtcgcggagatcttctattcgaacccgatgaagtcg
cgcgcctacctcgagtacgccgcggccaagggcgtcgagtggtacgtcgtggactgcgtc
gaggaagtggtcaaggtcaagtcggtgaaggccgatgccaagatgtacctgcgcatcgac
gcgcccaacatcggcagcgactggccgctcgcgggcaagttcggcgcgcacatgaatgac
gtgcccgagatcatcctggccgcagccgcgtgccaggcggacctcgccggcgtgaccttc
cacgtgggctcgcagtgcctgaatccggaaaactggcgcgtgggcatggagcgcgcgcgc
aaggtgttcgcatcgatgcgcaccgccggcctcaagccgcgcctgctcaaccttggtggc
ggctaccccgtgcgccacgtgaagccgatgccgtcgatcgagacgatcgcggacctcatc
aaccgcgagctgcgccacttcgggcccgagatccagatcatcgccgagcccggccgctac
ctcgtctccgacgcgggctacttcatctgccgcgtggtgggcacggccacccgtaacgac
cagcgctggatgtattgggacgcgggcgtgttcggcggcgtgatcgagaccaccgagggc
ctgcgctacaacatctacaccgatcgcgatggcgaacccgtcgcgtggaacgtggccggc
cccacgtgtgattccgtcgacgtcgtgatgcgtgacgagctccttccgggcgacctgcag
gaaggcgacttcatcttcatcaagaacgccggcgcgtacaccactgcgtacgcgagcaat
ttcaacgggtttcccctacctgacgttgcgacgattggcagttga
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