Variovorax sp. PAMC 28711: AX767_18780
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Entry
AX767_18780 CDS
T04325
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vaa03009
]
AX767_18780 (rimO)
Enzymes [BR:
vaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AX767_18780 (rimO)
Ribosome biogenesis [BR:
vaa03009
]
Prokaryotic type
ribosomal protein modification factors
AX767_18780 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AMM26165
UniProt:
A0A126ZIA9
LinkDB
All DBs
Position
3898086..3899492
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AA seq
468 aa
AA seq
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MSEVVSPERTAMPAAPKVGFVSLGCPKALTDSELILTRLSAEGYQTSKTFEGADLVIVNT
CGFIDDAVRESLDTIGEALAANGRVIVTGCLGAKSGEAGGNLVRQMHPSVLAVTGPHATQ
EVMDAVHANLPKPHDPFIDLVPDAFGIAGLKLTPRHYAYLKISEGCNHRCTFCIIPSMRG
DLVSRPIGDVLNEAKALFEGGVKELLVISQDTSAYGVDTKYRMGFFNGKPVKTRMLDLVR
ELGEIAEPYGAWVRLHYVYPYPSVDDVIPLMASGQVLPYLDVPLQHSHPDVLKRMKRPAS
GERNLERIARWREVCPELVIRSTFIAGFPGETEEEFEHLLDFIREAQIDRAGCFAYSPVE
GATANDIPGMLATEERETRRARFMEVAEAVSIAKLQRRIGATMQVLVDAAPGLGRKGGVG
RTYADAPEIDGIVRLLPPEKISKTLKVGEFTKARIVGAEGHDLIALPV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagttgtttcccccgaacgcacggccatgccggcggcccccaaagtcggtttt
gtgagcctgggctgccccaaggcactgaccgattccgaattgatcctcacgcggttgagc
gccgagggctatcagacctccaagacgttcgaaggtgccgatcttgtgatcgtgaacact
tgcggcttcatcgacgatgcggtgagagaaagtctcgacaccatcggtgaagcgctggcg
gccaacggtcgcgtgatcgtcaccggttgcctcggcgccaagagcggcgaggccggcggc
aatctggttcgccagatgcatcccagcgtgctggcggtgaccggcccgcacgcgacgcag
gaagtcatggacgcggtccatgccaatttgccgaaaccgcacgatccgttcatcgacctg
gtgccggatgcgttcggtatcgccggtctcaagctcacgccgcgccactatgcatatttg
aagatcagcgaaggctgcaatcatcgttgcaccttctgcatcattccttcgatgcgcggc
gacctcgtctcgcggccgatcggcgatgtgttgaacgaggcgaaggcgttgttcgaaggc
ggcgtgaaagagctgctcgtgatcagtcaggacacttcggcgtatggcgtcgacaccaag
taccgcatgggttttttcaacggcaaacccgtcaagacgcgcatgctggatctggtgcgc
gaactgggtgaaatcgccgagccgtacggtgcatgggtgcgcttgcattacgtgtacccg
tacccgagcgttgacgatgtgattccgttgatggcgagcggtcaggtgctgccgtacctc
gacgtgccgttgcagcacagccaccccgatgtgctgaagcgcatgaagcgccctgcgagc
ggcgaacgcaatctggagcgcatcgcacgatggcgcgaggtatgccccgaactggtgatc
cgcagcaccttcatcgccggttttccgggcgagaccgaagaagagttcgagcacttgctc
gacttcatccgcgaagcgcagatcgatcgtgcgggatgcttcgcctacagcccggtcgaa
ggtgccactgccaacgacattccggggatgctggcgacggaagaacgcgagacgcgccgt
gcgcgtttcatggaagtcgcggaggcggtgtcgatcgcgaaactgcagcgccggatcggc
gccacgatgcaggtgctcgtggacgccgcgccgggtctgggccgcaagggcggcgtcggc
aggacctatgccgatgcgcctgaaatcgatggcatcgttcggctgttgccccccgaaaag
atcagcaagacgttgaaagtcggtgagttcaccaaggcccggatcgtcggcgccgagggt
cacgatctcatcgcgctgcctgtttga
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