Variovorax sp. PAMC 28711: AX767_19375
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Entry
AX767_19375 CDS
T04325
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00300
Lysine biosynthesis
vaa01100
Metabolic pathways
vaa01120
Microbial metabolism in diverse environments
vaa01230
Biosynthesis of amino acids
Module
vaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AX767_19375
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vaa01002
]
AX767_19375
Enzymes [BR:
vaa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AX767_19375
Peptidases and inhibitors [BR:
vaa01002
]
Metallo peptidases
Family M20
AX767_19375
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Gene cluster
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Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AMM26271
UniProt:
A0A126ZII1
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All DBs
Position
complement(4015464..4016645)
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AA seq
393 aa
AA seq
DB search
MSRTLQLAEHLISRPSVTPDDAGCQTILGARLTALGFTLETLESGPADLRVTNLWAKRLA
APAGASQKTRKTLAFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGRGACDMKTSIAAFV
VAIEEFLETTPDPKLNLALLLTSDEEGPAVDGTVIVCDTLSARNETVDYCIVGEPTAVER
CGDMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHAFAPALAELVAINAAGGWDAGNA
YFQPTSWQISNIHAGTGASNVIPGSAVVDFNFRFSTESTPEALQRRVVAVLDAHGVDHDL
RWTVGGLPFLTTPGELVEAVQAAITDETGFTTELSTSGGTSDARFIARICKQVIELGPVN
ASIHKIDEHIDVASIETLKNIYRRTLERLNGLQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaacgctccagctcgccgaacacctcatttcgcgcccctctgtcacgcccgat
gacgcgggctgccagaccatcctgggcgcacggctgacagcgctcggcttcacgctggaa
acccttgaaagcgggcccgctgatctcagggtcaccaatctgtgggctaagcgattggcg
gcccccgcaggtgccagccagaaaacgcgcaagaccctcgctttcgcagggcacaccgat
gtcgtgccgaccggcccggtcgagcagtggaccagccaccccttcacccccacgcaccgc
gacggcaagctgtacggacgcggcgcgtgcgacatgaagacttcgatcgccgccttcgtg
gtcgcgatcgaagagttcctcgaaacaacgcccgacccgaagctcaacctcgcgctgctg
ctcaccagcgacgaggaaggtccggccgtcgacggcaccgtgatcgtttgcgacaccctg
tcggcgcgcaatgaaaccgtcgactactgcatcgtcggcgagccgaccgccgtcgagcgc
tgcggcgacatgatcaagaacggccggcgcggcacgatgagcggcaagctcaccgtcaag
ggcgtgcagggccacatcgcctacccgcacctggcgaagaacccggtgcatgccttcgcg
cccgcgctggccgagctcgtggccatcaacgcggcgggtggctgggacgctggcaatgcc
tattttcagccgacaagctggcagatcagcaacatccatgcgggtacaggcgccagcaac
gtgatcccaggcagcgcggtggtcgatttcaacttccgcttctcgaccgagtcgacgccc
gaggcgctgcagcgccgcgtcgtggcggtgctcgatgcgcacggcgtcgaccatgacctc
cgatggacggtgggcggcctgcccttcctgaccacgccgggcgagctggtcgaagccgtg
caggcggccatcaccgacgagaccggcttcacgaccgagctgtcgaccagcggcggcacc
agcgacgcgcggttcatcgccaggatctgcaagcaggtgatcgagctcggccccgtcaac
gccagcatccacaagatcgacgagcacatcgacgtggcctcgatcgagacgctgaagaac
atctatcggcgcacgcttgagcggctgaacgggctgcaatga
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