Variovorax sp. PAMC 28711: AX767_20355
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Entry
AX767_20355 CDS
T04325
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaa03016
]
AX767_20355
Enzymes [BR:
vaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
AX767_20355
Transfer RNA biogenesis [BR:
vaa03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AX767_20355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
NAD_binding_8
NAD_binding_9
Pyr_redox
3HCDH_N
HI0933_like
Lycopene_cycl
FAD_binding_3
MurD-like_N
AlaDh_PNT_C
FAD_binding_2
XdhC_C
GIDA
ApbA
HcgC
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AMM26438
UniProt:
A0A126ZH33
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Position
4222760..4224568
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AA seq
602 aa
AA seq
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MTEPVSWRADGVPQSARFDDIYHTETGALAQSRHVFLGGCDLPEAWANRPQWLILETGFG
LGLSFLTTWQAWRDDPERPRLLHFVSIEAHPVGADDLMRGAAAYPELVGLAEALAAQWHG
LLPGFHRLAFDEGRVLLTLCVGDVQPMLRAQRFEADSIFLDGFSPQCNPDMWSPETLKAV
SRFARVGTGIATWTIARAVRDALAQNGFKVEKRQGLPPKRDCLRGVFAPEWTVRRRGALP
ERIDMPGHCAVIGAGLAGAAVAASLSRRGWRVTVLDAADHAAAGASALPVGMLAPHVSPD
DALLSRLTRAGVRATWTELARLLEHGTDWAATGVLERRSDGDVRVPAGWQADGPNESFPA
DATSLRHARAAWVRPRALVGAWLREPGIDVRHGAQVSRLERAGAGWRLVDAAGAMLLDAD
RVVIAGGIGSATLATALPLQPVRGQVEWGHAASGLAALPATPTNGDGHLIARVPDTNGSA
LWLTGATFDRDSTDLGPREADTGVNRVRLARLHPEAAAALATAFEGGRTHTWVGVRCASA
DRRPLVGPLDETALPGVWVSTAMGSRGLTFAALCAELLAAHWHGEPLPLPTTLSRSLDTR
RL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgtttcctggcgtgcagacggcgttccgcagagcgcgcgcttcgacgac
atctatcacaccgaaaccggcgcgctcgcgcagtcgcggcatgtgtttctcggcggctgc
gacctgcccgaggcgtgggcgaatcggccgcaatggctgattctcgaaaccggattcggt
ctcggcctcagtttcctgacaacctggcaagcctggcgcgatgacccggagcgcccacgg
ctgctgcatttcgtctccatcgaagcccatccggtcggggccgacgacctcatgcgcggc
gcggcggcttaccccgaactcgtggggctggccgaagcgctggccgcgcagtggcacgga
ctgctgccgggctttcaccgcctcgccttcgacgaagggcgcgtgctgctcacgctgtgc
gtcggcgatgtgcagcccatgctgcgcgcccagcgcttcgaggccgacagcatttttctc
gacggcttcagcccgcagtgcaaccccgacatgtggtcgcccgaaacgctcaaggcggtt
tcgcgcttcgcccgggtcggcaccggcatcgcgacctggaccatcgcgcgcgcggtgcgc
gatgccttggcgcagaacggtttcaaggtcgaaaaacgccagggcctgccgcccaagcgc
gattgccttcgcggcgtgttcgcgcccgaatggacggttcggcggcgcggtgcgctgccg
gaacgtatcgacatgccgggccactgcgcggtgatcggcgcggggctggccggtgctgcg
gtggccgcgagcctgtcgcgccgcggctggcgcgtgacggtgcttgacgccgccgaccac
gcggcggcgggcgcttccgccttgccggtcggcatgctcgcgccccacgtgtcgccggac
gacgcgctgctctcgcgcctcacgcgggcaggcgtgcgcgccacctggaccgaactggcg
cggttgctcgaacacggcaccgactgggctgccaccggcgtgctggagcgccgttccgat
ggcgatgtgcgggtgcccgcgggctggcaggccgacggccccaacgaatcgttcccggcg
gacgcgacctcgctccggcacgcgcgcgcggcgtgggtgcggccccgcgcgctggtcggc
gcctggctgcgcgagccgggcatcgatgtgcgccatggcgcacaggtgtcgcgcctcgaa
cgtgcgggcgccggctggcggctggtcgacgcggcaggcgcaatgctgctcgacgccgat
cgcgtggtcatcgcgggcgggatcggcagcgcgacccttgcgaccgcccttcccctgcag
ccggtgcggggtcaagtggaatggggtcacgcggcgtccgggctcgccgcgctcccggcc
acgccaacaaacggcgatggccacctgatcgcgcgcgtgcccgatacgaacggcagcgcg
ctctggctgaccggcgcgaccttcgaccgcgacagcaccgatcttgggccgcgcgaagca
gacaccggcgtgaaccgcgttcgcctcgcccggctgcaccccgaagccgccgcagcgctg
gcgactgcgtttgaaggtggccgcacgcacacctgggtcggcgtgcgctgcgcctccgca
gatcgccggccgctggtcggcccactcgacgaaaccgcactgcccggcgtctgggtcagc
accgcgatgggctcccgcgggctcaccttcgccgccctgtgtgcagaactgctcgcggcg
cactggcacggcgaaccactgccgttgccaaccacactttcgcgatctttggacacacgc
cggctttga
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