Vagococcus xieshaowenii: E4Z98_07055
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Entry
E4Z98_07055 CDS
T05932
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
vac
Vagococcus xieshaowenii
Pathway
vac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E4Z98_07055 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vac03021
]
E4Z98_07055 (rpoE)
03400 DNA repair and recombination proteins [BR:
vac03400
]
E4Z98_07055 (rpoE)
Transcription machinery [BR:
vac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E4Z98_07055 (rpoE)
DNA repair and recombination proteins [BR:
vac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E4Z98_07055 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
QCA29082
UniProt:
A0A4Z0D7U8
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All DBs
Position
complement(1465772..1466383)
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AA seq
203 aa
AA seq
DB search
MEIKAFDGVNKEELSMIEVAHAILEERGEIIDFSDLVNQIQNYLGKSDSVIREELSQFYT
DLNIDGSFISLGENRWGLRSWYPIDSIDEEVSNYQDEDEDDRPVRKKRKRVNAFIDSDED
AIDYNDDDPEDSDLSVDDDDYIDEDEDDEEIAEYNKDLSELGADDIDDEDDIPEGVEDEL
TIVHEDDLDSDLDYEDEEDEEEL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggagattaaagcgtttgatggtgtcaataaagaagaattgtcaatgattgaagtagca
catgcgattttagaagagcgtggggagattattgatttctctgatcttgttaaccaaatc
caaaattatttagggaaatctgatagtgtgattcgtgaagaactatcacaattctataca
gatttaaatatcgatggtagttttatttctttaggagaaaatcgttggggattacgttca
tggtatccaattgactcaatcgatgaagaagtatctaactatcaagatgaagatgaagac
gatcgtccagtacgtaaaaaacgtaaacgtgttaatgcctttatcgacagtgatgaagat
gcaattgattacaatgatgatgatccagaagatagtgatttaagtgttgatgatgatgat
tacatcgatgaagatgaagatgatgaagaaattgcagaatataataaagacttatctgaa
ttaggcgcagatgatatcgacgatgaagatgatattccagaaggcgttgaagatgaatta
actatcgttcatgaagatgatctagacagtgatttagattatgaagatgaagaagacgaa
gaagaattataa
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