Vibrio alfacsensis: D1115_11800
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Entry
D1115_11800 CDS
T05841
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00730
Thiamine metabolism
vaf01100
Metabolic pathways
vaf01240
Biosynthesis of cofactors
vaf04122
Sulfur relay system
Module
vaf_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D1115_11800 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
D1115_11800 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaf03016
]
D1115_11800 (thiI)
Enzymes [BR:
vaf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
D1115_11800 (thiI)
Transfer RNA biogenesis [BR:
vaf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
D1115_11800 (thiI)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Dak2
Motif
Other DBs
NCBI-ProteinID:
AXY01718
UniProt:
A0A347US89
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Position
I:complement(2408950..2410398)
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AA seq
482 aa
AA seq
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MKFIVKPHPEIFVKSESVRKRFTKILECNIRNIVKNRTESVAVFNRRDHIEVTSEKDDFH
AEVLEILTHTPGIHHVLEVKQSDFTDLHNIYEQVLELSRETIENKTFVVRAKRRGKHDFT
SIELERYVGGGLNQAVESARVKLHKPDVTINVEVNNDKLNQVLARHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVSHYLWNKYGSSAKVRFI
SVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGKVAEKFKIEALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIINLARDIGTEDFAKTMPEYCGVISKKPTVKAIKGKL
LAEEEKFDFSILDQVVQEARVMDIRDIAKESEQAAPEVEQVQAVEDHAIVLDIRSPDEED
DNPLEIDGVDVKHIPFYKLSTQFGDLDQSKTYLLYCERGVMSRLQALYLQEQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgtaaagccccatccagaaatttttgttaaaagtgaatcggtgcgcaag
cgcttcacaaagattttagagtgtaacattcgtaacatcgtgaagaaccgtaccgaatct
gttgcggtattcaaccgtcgtgatcacattgaagtgacgtcagagaaagatgatttccac
gcggaagtcttggaaatcctgacacacacgccaggcattcaccatgttctagaagtaaag
cagtctgattttaccgatctgcacaacatctatgagcaagtgttagagctaagccgtgaa
acgattgaaaacaaaacgtttgtggtacgtgcgaaacgtcgtggtaagcatgactttacg
tctatcgagctagaacgttatgttggcggcggtcttaaccaagcggttgaaagtgcacgc
gtgaagctgcataaaccagacgtaacgatcaacgttgaagtgaataatgacaaactaaat
caagtattggcgcgtcataaaggtctaggtggcttccctctaggaacgcaagaagatgta
ttaagcctgatttctggcggtttcgactctggcgtatcaagctaccttcacatcaaacgt
ggttctaaagttcactactgtttctttaacttaggtggtcctgctcacgaaatcggcgtt
aagcaggtttctcattacctatggaacaaatacggttcttcagcaaaagtacgttttatc
tcagtggattttgagcctgtcgtggctgagatccttgagaaagttgatgatggccaaatg
ggcgttatcttaaagcgtatgttcatgcgtgcggctggtaaggttgcagagaagtttaag
attgaagcattggtgacgggtgaggctctaggccaagtttcaagccaaacgctaactaac
cttcgccacatcgataacgtcactgatacgctgattctgcgtccgcttattaactgggat
aaagaagacatcattaacctagcgcgtgatatcggtacagaagacttcgctaagacaatg
ccagaatactgtggcgttatttctaagaagcctacggtaaaagcgatcaaaggaaaactg
ctcgcagaagaagagaaattcgacttcagcattcttgatcaagtggtacaagaagcgcgt
gttatggacattcgtgatatcgcgaaagagtctgagcaagcagcacctgaagtagaacaa
gttcaagcggtagaagatcacgctattgtgttggatatccgtagtcctgacgaggaagac
gataacccactggaaattgatggtgttgatgttaagcacatcccattctataagctaagt
actcaatttggtgatttagatcagtctaagacttacctattgtactgtgagcgtggggtg
atgagccgtttacaagcgctgtacttgcaagagcaagggtttaacaacgtaaaagtttac
cgcccgtaa
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